Gene detail

Detailed information of Ppa0G365070 in Paragorgia papillata

Genomic Location: Contig00531:1145776...1150683
NR annotation: CAB3980998.1, macro domain-containing [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Ppa0G365070

ATGGCGTGTTCTTTAGAAGCTGTCTCGATTGGTAAACTAGAAGATCTTCTTCAATGTTCGATATGTTTGGGAACAGTGAAAGATCCCCGAACATTGCCTTGCTTTCATTGTTATTGTAAGTCTTGCCTGGAGAGATTTGTAAAGAACCATCGTGAAAAAGCAGTTGGGCGACAAGTAAAGGACTTTGAGTGCCCGAACTGTCGTAGCCAATTCACTTTGAATCCGGGAGAAGAAGTAACAGACATGAAGCCAAATCATTTTATCTGCAATATGCTAGAGGTCATGGCCGTTCAAAATCGACTAAAAGTTGTCTCCTGTTCTCACTGTGAAGAGCCTTCGGTTGGCCGTTGTGTGGACTGTGAAGTGTTTTTGTGCCAAGAATGTCTTGCTGGTCACAACAACTATCGTGGCTTCGCCGAACATTCCGTTTTATCGATGGATGAATTATCGAAACCGGAGAATCAAGCCAAGATCAGAAAAAAGCTGCATTGCCGAGAACACAAGACGAAGGCGCTGAGGTTTTATTGTGAAACATGCGAGGAGCTTATTTGTCGACACTGCACGGATTTTAACCATGAGAAACCCGAGCATTCTTGGCTGCCAGTCGATAAAGTGGCTGAGAAACAAAAGCAACTGTTGGCTGAAAGCTGCCCAGCGCTTGAGAATAAATTGAAGCAAGGCAACCAAGCACTGATAAGGGTAACATATGTTACTCAGTCTCTGGCAAAGGTCAAGGAACGAGTTAAGCTAGACATCAATGCCCGTAGAGACACTATACTGAAAGCAGTGACAAGACAACTAAACGAGAAAGCCCAAGATCTAATCAAGCAAGTCGATGGAATCTACAGCCGCAAGCACGATTCCTTAGCAAAGCAGAAAGTAGAATTTCAAGCTTATATCGAGAAGCTTGAAAGCTGTGTCAATCTTTCAAAGGGGATGCTGACGAAAGGAACAGACGAAGAAATCTTATCATCTGCAAAGATGATGAAAGAAAACATTGAAAAACTACGGAAGGAGATTCCGAAGACTATGGAACCTAATGGTGATGATGAAATCTGTTACGAATATGGTCCGATTATTAACATAATGACAGTTGGTAAAGTTTGTGCTGAAATGGGTAAGGTTGAAGACAGGAACCAGACCATCCTAAACAAAATAGTGAGAATATCGTATGCTGATAGTTCGAACGATAAAGATAATATTTCTTCAAGTGTTACAAAAGTGGGAATCAATGACACTGGTTTAGCAGCAGAACCTTTTGCTTTTATAGCAAAGTCTACTGATGATAAAAGTGAGCTGGCAACCGAATCATCAATTTCTCCAAATGTCACAACTGAGAACAATGACAAAATGTCTACTGGTGGAAAGCCGGAAAATGGTGTTTACGGGAGAATTCGAAAGAAACAGCTTTCGTGCAACCTTTCCAAAAAGATGAAATTATTTGTTTACCAAGGTGACATTACCGAAGAGAAAGTCGATGCTATTGTCAATCCTGCAAATGAAGACCTTCGCCATGTTACAGGTGCAGCCTTCACCATAGCAAAACAAGGCGGGGAGTTAATCCAAATTCAGAGTGATGAAATCGTGAATCGGCGGGGAAAATCACTCAAACCAGGAGAAGTAGAAATAACAACAGCTGGGGATCTACCTTGTAACTTTATTGTCCATGCTGTTGGACCAAGGTGGGTATATTGTTCAAGGAATGAAGCCCGTAAACTGTTACAAAACGCAGTCCTAAACAGTTTACGAATGGCCAGTCAAAACAAAGCTCAATCGATTGCTATTCCTGCCATAAGCTCAGGTGTATTTGGTGTACCCATCAAACTTTGTGCTGATGTTCTATTTACTGTTGTGGAGGAATTTAGCGAAGCTGCCACAGATTCTGAGAATCTGAAAGAGATTCGCTTTGTTAACATTGATAAACCAACAGTTGACGCTTTTGAGCAAGAGATGAGAAAGCGATATGGCGGATCCGTTAAAAATGAAAGTCGTGAAAATGGTGTTTCAAAAGGAAATAGAATGAATACAAGCATGTCCAACAATCAGAATCAAGCAAATTCTCAGCAGAACTTTCGTTCTGAAAATTTGAAGACAGAAACAAGAAAGGCTGGACGGGGCTTATCAACAGACTGA

Transcript

Ppa0G365070

Protein

Uniprot

Gene family

Uniprot term	Description
Q460N5	Protein mono-ADP-ribosyltransferase PARP14 OS=Homo sapiens OX=9606 GN=PARP14 PE=1 SV=3
Q2EMV9	Protein mono-ADP-ribosyltransferase PARP14 OS=Mus musculus OX=10090 GN=Parp14 PE=1 SV=3
Q9WYX8	Uncharacterized protein TM_0508 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0508 PE=3 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00643	zf-B_box	B-box zinc finger	Domain	Interproscan
PF13445	zf-RING_UBOX	RING-type zinc-finger	Domain	Interproscan
PF01661	Macro	Macro domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002589	Domain	Macro domain	Interproscan
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR047153	Family	TRIM45/56/19	Interproscan
IPR043472	Homologous_superfamily	Macro domain-like	Interproscan
IPR027370	Domain	Zinc finger, RING-type, eukaryotic	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR25462	BONUS, ISOFORM C-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan