Gene detail

Detailed information of Ppa0G368300 in Paragorgia papillata

Genomic Location: Contig00533:1111689...1112435
NR annotation: XP_028393096.1, probable U3 small nucleolar RNA-associated protein 11 [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y3A2	Probable U3 small nucleolar RNA-associated protein 11 OS=Homo sapiens OX=9606 GN=UTP11 PE=1 SV=2
Q10106	Probable U3 small nucleolar RNA-associated protein 11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp11 PE=3 SV=1
Q8R5K5	Probable U3 small nucleolar RNA-associated protein 11 OS=Rattus norvegicus OX=10116 GN=Utp11 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007879 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03998 all species →	Utp11	Utp11 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007144 all species →	Family	Small-subunit processome, Utp11	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12838 all species →	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006364 all species →	Biological Process	rRNA processing	Interproscan
GO:0032040 all species →	Cellular Component	small-subunit processome	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14769	UTP11; U3 small nucleolar RNA-associated protein 11	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.