Detailed information of Ppa0G371530 in Paragorgia papillata

Genomic Location: Contig00542:383297...392328
NR annotation: CAB3995922.1, E3 ubiquitin- ligase UBR4 [Paramuricea clavata]
Species abbreviation PPAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5T4S7E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens OX=9606 GN=UBR4 PE=1 SV=1
A2AN08E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1
Q2TL32E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001776 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13764
all species →		E3_UbLigase_R4E3 ubiquitin-protein ligase UBR4FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045189
all species →		FamilyE3 ubiquitin ligase UBR4-likeInterproscan
IPR025704
all species →		DomainE3 ubiquitin ligase UBR4, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21725
all species →		E3 UBIQUITIN-PROTEIN LIGASE UBR4Interproscan

 Gene Ontology
No Gene Ontology signature was detected for Ppa0G371530. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G371530.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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