Detailed information of Ppa0G374020 in Paragorgia papillata

Genomic Location: Contig00544:2049082...2050295
NR annotation: CAB3980203.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B5FZA8LYR motif-containing protein 4 OS=Taeniopygia guttata OX=59729 GN=LYRM4 PE=3 SV=1
Q0VCG0LYR motif-containing protein 4 OS=Bos taurus OX=9913 GN=LYRM4 PE=3 SV=1
Q9HD34LYR motif-containing protein 4 OS=Homo sapiens OX=9606 GN=LYRM4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010700 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05347
all species →		Complex1_LYRComplex 1 protein (LYR family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045297
all species →		DomainLYRM4, LYR domainInterproscan
IPR051522
all species →		FamilyIron-sulfur cluster assembly LYR proteinInterproscan
IPR008011
all species →		DomainComplex 1 LYR protein domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13166
all species →		PROTEIN C6ORF149Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016226
all species →		Biological Processiron-sulfur cluster assemblyInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:1990221
all species →		Cellular ComponentL-cysteine desulfurase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K22069LYRM4; LYR motif-containing protein 4-Mitochondrial biogenesisko03029deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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