Detailed information of Ppa0G375040 in Paragorgia papillata

Genomic Location: Contig00544:3407055...3412498
NR annotation: CAB4025024.1, ranBP-type and C3HC4-type zinc finger-containing 1-like [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9WUB0RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Mus musculus OX=10090 GN=Rbck1 PE=1 SV=2
Q62921RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Rbck1 PE=1 SV=3
Q9BYM8RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Homo sapiens OX=9606 GN=RBCK1 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01485IBRIBR domain, a half RING-finger domainDomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002867DomainIBR domainInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR047559DomainHeme-oxidized IRP2 ubiquitin ligase 1, modified RING finger, HC subclassInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR047558DomainHeme-oxidized IRP2 ubiquitin ligase 1, BRcat domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR044066DomainTRIAD supradomainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR051628FamilyLinear Ubiquitination-Associated E3 LigasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22770UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0097039Biological Processprotein linear polyubiquitinationInterproscan

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