Gene detail

Detailed information of Ppa0G379600 in Paragorgia papillata

Genomic Location: Contig00556:1580501...1580788
NR annotation: CAB4027213.1, ATP synthase-coupling factor 6, mitochondrial [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5RBY3	ATP synthase peripheral stalk subunit F6, mitochondrial OS=Pongo abelii OX=9601 GN=ATP5PF PE=3 SV=1
P21571	ATP synthase peripheral stalk subunit F6, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pf PE=1 SV=1
Q8SPH6	ATP synthase peripheral stalk subunit F6, mitochondrial OS=Macaca fascicularis OX=9541 GN=ATP5PF PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0011727 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05511 all species →	ATP-synt_F6	Mitochondrial ATP synthase coupling factor 6	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008387 all species →	Family	ATP synthase-coupling factor 6, mitochondrial	Interproscan
IPR036204 all species →	Homologous_superfamily	ATP synthase-coupling factor 6 superfamily, mitochondrial	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12441 all species →	ATP SYNTHASE COUPLING FACTOR 6, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000276 all species →	Cellular Component	obsolete mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	Interproscan
GO:0015078 all species →	Molecular Function	proton transmembrane transporter activity	Interproscan
GO:0015986 all species →	Biological Process	proton motive force-driven ATP synthesis	Interproscan
GO:0005753 all species →	Cellular Component	obsolete mitochondrial proton-transporting ATP synthase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02131	ATPeF0F6, ATP5J; F-type H+-transporting ATPase subunit 6	-	Diabetic cardiomyopathy	ko05415	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.