Genomic Location: Contig00556:2804382...2845887
NR annotation: CAB3989157.1, TBC1 domain family member 1 isoform X4 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families
| CDS |
| Ppa0G380390 |
| Transcript |
| Ppa0G380390 |
| Protein |
| Ppa0G380390 |
| UniProt accession | Description |
|---|---|
| O97790 | TBC1 domain family member 1 OS=Bos taurus OX=9913 GN=TBC1D1 PE=2 SV=2 |
| Q86TI0 | TBC1 domain family member 1 OS=Homo sapiens OX=9606 GN=TBC1D1 PE=1 SV=2 |
| Q60949 | TBC1 domain family member 1 OS=Mus musculus OX=10090 GN=Tbc1d1 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003545 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00640 all species → | PID | Phosphotyrosine interaction domain (PTB/PID) | Domain | Interproscan |
| PF11830 all species → | DUF3350 | Domain of unknown function (DUF3350) | Family | Interproscan |
| PF00566 all species → | RabGAP-TBC | Rab-GTPase-TBC domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006020 all species → | Domain | PTB/PI domain | Interproscan |
| IPR011993 all species → | Homologous_superfamily | PH-like domain superfamily | Interproscan |
| IPR021785 all species → | Domain | Domain of unknown function DUF3350 | Interproscan |
| IPR000195 all species → | Domain | Rab-GAP-TBC domain | Interproscan |
| IPR035969 all species → | Homologous_superfamily | Rab-GAP-TBC domain superfamily | Interproscan |
| IPR050302 all species → | Family | Rab GTPase-activating TBC domain-containing protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47219 all species → | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE | Interproscan |
Ppa0G380390. This gene does have a gene model — the search simply returned no hit.Ppa0G380390.
