Gene detail

Detailed information of Ppa0G380620 in Paragorgia papillata

Genomic Location: Contig00556:3169238...3170350
NR annotation: CAB4018260.1, 40S ribosomal S25 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8ISN9	Small ribosomal subunit protein eS25 OS=Branchiostoma belcheri OX=7741 GN=RPS25 PE=2 SV=1
Q90YP9	Small ribosomal subunit protein eS25 OS=Ictalurus punctatus OX=7998 GN=rps25 PE=2 SV=1
Q6PBI5	Small ribosomal subunit protein eS25 OS=Danio rerio OX=7955 GN=rps25 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009218 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03297 all species →	Ribosomal_S25	S25 ribosomal protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004977 all species →	Family	Small ribosomal subunit protein eS25	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12850 all species →	40S RIBOSOMAL PROTEIN S25	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0022627 all species →	Cellular Component	cytosolic small ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02975	RP-S25e, RPS25; small subunit ribosomal protein S25e	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.