Gene detail

Detailed information of Ppa0G381180 in Paragorgia papillata

Genomic Location: Contig00557:994508...995873
NR annotation: CAB3985001.1, transcription factor Sox-3-like, partial [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6NVN0	Transcription factor Sox-2 OS=Xenopus tropicalis OX=8364 GN=sox2 PE=2 SV=1
P48431	Transcription factor SOX-2 OS=Homo sapiens OX=9606 GN=SOX2 PE=1 SV=1
P54231	Transcription factor SOX-2 OS=Ovis aries OX=9940 GN=SOX2 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan
PF12336	SOXp	SOX transcription factor	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR009071	Domain	High mobility group box domain	Interproscan
IPR050140	Family	SRY-related HMG-box transcription factors	Interproscan
IPR022097	Family	Transcription factor SOX	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10270	SOX TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0009653	Biological Process	anatomical structure morphogenesis	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan