Gene detail

Detailed information of Ppa0G381350 in Paragorgia papillata

Genomic Location: Contig00557:1348605...1360406
NR annotation: XP_028412801.1, RING finger protein 121-like [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9H920	E3 ubiquitin ligase RNF121 OS=Homo sapiens OX=9606 GN=RNF121 PE=1 SV=1
Q6DD32	E3 ubiquitin ligase Rnf121 OS=Xenopus laevis OX=8355 GN=rnf121 PE=2 SV=1
Q6P360	E3 ubiquitin ligase Rnf121 OS=Xenopus tropicalis OX=8364 GN=rnf121 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007410 (this species only)
Ubiquitin family	E3\|E3 activity RING\|RING · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12861 all species →	zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024991 all species →	Domain	Anaphase-promoting complex subunit 11, RING-H2 finger	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR040176 all species →	Family	RING finger protein RNF121/RNF175	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13407 all species →	RNF121 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005680 all species →	Cellular Component	anaphase-promoting complex	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0031145 all species →	Biological Process	anaphase-promoting complex-dependent catabolic process	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0097602 all species →	Molecular Function	cullin family protein binding	Interproscan
GO:0000139 all species →	Cellular Component	Golgi membrane	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0030433 all species →	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15698	RNF121_175; RING finger protein 121/175	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.