Gene detail

Detailed information of Ppa0G384280 in Paragorgia papillata

Genomic Location: Contig00562:471846...487090
NR annotation: XP_013421160.1, succinate--hydroxymethylglutarate CoA-transferase-like [Lingula anatina]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9HAC7	Succinyl-CoA:glutarate CoA-transferase OS=Homo sapiens OX=9606 GN=SUGCT PE=1 SV=3
Q7TNE1	Succinyl-CoA:glutarate CoA-transferase OS=Mus musculus OX=10090 GN=Sugct PE=1 SV=2
Q68FU4	Succinyl-CoA:glutarate CoA-transferase OS=Rattus norvegicus OX=10116 GN=Sugct PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003067 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02515 all species →	CoA_transf_3	CoA-transferase family III	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023606 all species →	Homologous_superfamily	CoA-transferase family III domain 1 superfamily	Interproscan
IPR044855 all species →	Homologous_superfamily	CoA-transferase family III domain 3 superfamily	Interproscan
IPR003673 all species →	Family	CoA-transferase family III	Interproscan
IPR050483 all species →	Family	CoA-transferase III domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48207 all species →	SUCCINATE--HYDROXYMETHYLGLUTARATE COA-TRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18703	SUGCT; succinate---hydroxymethylglutarate CoA-transferase	EC:2.8.3.13	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.