Detailed information of Ppa0G385050 in Paragorgia papillata

Genomic Location: Contig00562:1725473...1725884
NR annotation: CAB3987095.1, twist-related 2-like [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P13903Twist-related protein OS=Xenopus laevis OX=8355 GN=twist1 PE=2 SV=1
O96642Twist-related protein OS=Branchiostoma belcheri OX=7741 GN=TWIST PE=2 SV=1
Q8WVJ9Twist-related protein 2 OS=Homo sapiens OX=9606 GN=TWIST2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009411 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010
all species →		HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036638
all species →		Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR050283
all species →		FamilyE-box Binding Transcriptional RegulatorsInterproscan
IPR011598
all species →		DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR015789
all species →		DomainTwist-related, basic helix-loop-helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23349
all species →		BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046983
all species →		Molecular Functionprotein dimerization activityInterproscan
GO:0000977
all species →		Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0032502
all species →		Biological Processdevelopmental processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G385050.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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