Detailed information of Ppa0G391540 in Paragorgia papillata

Genomic Location: Contig00569:925777...927836
NR annotation: CAB4014428.1, Transcription initiation factor TFIID subunit 2 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q32PW3Transcription initiation factor TFIID subunit 2 OS=Danio rerio OX=7955 GN=taf2 PE=2 SV=2
Q6P1X5Transcription initiation factor TFIID subunit 2 OS=Homo sapiens OX=9606 GN=TAF2 PE=1 SV=3
Q5ZIT8Transcription initiation factor TFIID subunit 2 OS=Gallus gallus OX=9031 GN=TAF2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002730 (this species only)

 Pfam domain
No Pfam domain signature was detected for Ppa0G391540. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR027268
all species →		Homologous_superfamilyPeptidase M4/M1, CTD superfamilyInterproscan
IPR037813
all species →		FamilyTranscription initiation factor TFIID subunit 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15137
all species →		TRANSCRIPTION INITIATION FACTOR TFIIDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000976
all species →		Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0003682
all species →		Molecular Functionchromatin bindingInterproscan
GO:0005669
all species →		Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006367
all species →		Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0016251
all species →		Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G391540.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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