Gene detail

Detailed information of Ppa0G392140 in Paragorgia papillata

Genomic Location: Contig00572:198703...258752
NR annotation: XP_028401919.1, HAUS augmin-like complex subunit 5 [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Ppa0G392140

ATGCTCTCCTCAGCTACGAAGAAAGCACGTACGAAGAAAACGTTGACTTTTTCGCACATTGATAAAGACCAAGTGGCTTTCGAACTGCGAAAGTGGGCTCTTGAAGAGCTGTGCTTTCGTCCACAAGGCCGTCATGTCAATAGCCGTATACCAAGTGTGGAGGAGTTTAAAATGTTATGCCGTGGTTCTATGATAGAAATATGGTTATATGTTATTCAACATGTTCGCCCTACTCAAATGGTTCAAAAGGTGAAAGGAAATCTGAAACTATCTTCGTTATTCCAGAATAAGAAAACATCTTCAAAAGATGTTTTGCAAGGTAAAGATGGCGAACATTTGAAGATTTTAAAAAGGAATACCGAACTTCGATCGCAAATAGCGCAAGTCGAAAAAGGTCTGCATCATCTTGAAAAAGAAATTATACAAACCGAACAGTCACGTGATGTAGTAAATAGCAAAACGTGCGATCTTGAGAAACGTTGTGCATTACTGTCATCTTACTCAAAGCAATGTCTTGAGAGAGCTAAAGTGTTTGACGAATTTAGACGAAGAATCGAAGGACGAATTTCACTTTACAAAGAAATTAGAAGGAAGTTATCTGGCGAAAGCACGTATTTTGTCCAAAAGCCATCGCTAACTGGTTTGCTTGGAACTTTGTCGACAAATGAACAAACTAGCTCTGTTGGTCTGGAGTCTGCCTGCACAAGAAATGTTCGAGAAACATGCGAAGCAATTGGTTCGTTCCTCCATCGTCTTCATAATGCGTACATGACGGATGACAGCCCTGTCAGATCTTACAGCGATAAAACCAAGGCACAGTTATGGACATCGGTTGAGAGTTTGCTTTCTCAACATGCTGCTCCAGATATCTATGCATCTTTAGCAAAAACAGCTTTGGATTCTTCCAGTAATCTTCAAGAACTGACTTCGAGGATTGACGTGAGAAAAGACGCCGAAGATTTGAAGTTCAAATATGAGAATTCTGGTCAGCTGTGTGATACGTCGTCTCCTCGTCCGCTTTTAGTGAGTGTTCATCAGTTGATCGAGGAGGGTCAAGCAGCACACTTTCAAAGATTTCTGGATACCGAAAAGGCAAGAAACGAAGTTTGCAAAGGGCACAAAATACTGCAAGAATTTCAACAAAATATGGAAACCAAACAAAAAGCTTTGTATGGAAATAACCCCGAACGGTTAGCACTGGCACTATCGCTCTATCGTACCGAATTGGAATTCGTCGCTTCCAAAGCGACCATGGAGTACATCGAGAAAGAAGTCCATGAGCTGGAGAAGTTGAGGTTTTGTAAGCAAGCTCAACTAGACACATTGTATGCAAAGTACAGGCAAATACAAGACTTCGAGAAATTTGTGCAAGCGAAGCAGAACATGACCCGGGGTTTGATAAAACTTAATTCCGACAGCAGAAAAAAACTAGACCAGCAGCAGATCGAGATAATCAAGTATACGCAGAATACACTGTGTGGACATGAAGCTCAAATTACTGCATTGTCCTCGGTGCTGTCTGACAGTGTTTCCAAGGATGTTACCTCGTTTGTTTCCCTGCCGTTACATCGGATCCAATTTTCCACGGTTGATGGTGACGGACGAATCCCGGTTTCCCAATTGTCGATTAACCGTCTTAAAGCCGGTAATTCCTCATCTGGAAACGATATGGTTGCTTCCATTTTAAAGAGCGTAGACTTTCCTGATTACAAGGATTCGGATGGATTGTTGCTAAATGTTATGGAAACAAAATTCGAAGTAACTGCAATGAGGGAATTCCTTAAATACAACAAGGATATTTCTGACTCACTAAGTGGGATGGAAGGAACCCGATCATCTCGTGATAATCATCTCGAAGATATAAAGGAAGCTGTCGCAGAGCACGAACGCGAAGAAACAAAACAAGTACTGCCTAGAGTACAAGAAAGTTTCTCAAAAGCCACTAAAGCATTGTCAGAGTACATCTTAGCTAAGGATACGGTTAATTCATGGTGGGAGCAGCCCGCTCAGTATACAGTACCGTGGGCTACTGTGGACGGAATGAACATGAGGCAATGGAAGGATCAGTGGACTGTTTTGACTACAAGACTCAGGCAGTTACAAATGAAACAGTGA

Transcript

Ppa0G392140

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9FMB4	AUGMIN subunit 5 OS=Arabidopsis thaliana OX=3702 GN=AUG5 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004610 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14817 all species →	HAUS5	HAUS augmin-like complex subunit 5	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029131 all species →	Family	HAUS augmin-like complex subunit 5	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28588 all species →	HAUS AUGMIN-LIKE COMPLEX SUBUNIT 5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0051225 all species →	Biological Process	spindle assembly	Interproscan
GO:0070652 all species →	Cellular Component	HAUS complex	Interproscan
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0007098 all species →	Biological Process	centrosome cycle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16588	HAUS5, AUG5; HAUS augmin-like complex subunit 5	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.