Gene detail

Detailed information of Ppa0G395920 in Paragorgia papillata

Genomic Location: Contig00576:848814...855330
NR annotation: CAB3987607.1, CCR4-NOT transcription complex subunit 1 isoform X5 [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A5YKK6	CCR4-NOT transcription complex subunit 1 OS=Homo sapiens OX=9606 GN=CNOT1 PE=1 SV=2
A0JP85	CCR4-NOT transcription complex subunit 1 OS=Xenopus tropicalis OX=8364 GN=cnot1 PE=2 SV=1
Q6ZQ08	CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16418	CNOT1_HEAT	CCR4-NOT transcription complex subunit 1 HEAT repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040398	Family	CCR4-NOT transcription complex subunit 1	Interproscan
IPR032194	Domain	CCR4-NOT transcription complex subunit 1, HEAT repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13162	CCR4-NOT TRANSCRIPTION COMPLEX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000288	Biological Process	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	Interproscan
GO:0000932	Cellular Component	P-body	Interproscan
GO:0017148	Biological Process	negative regulation of translation	Interproscan
GO:0030015	Cellular Component	CCR4-NOT core complex	Interproscan
GO:0060090	Molecular Function	molecular adaptor activity	Interproscan