Detailed information of Ppa0G396380 in Paragorgia papillata

Genomic Location: Contig00577:605188...613907
NR annotation: XP_028394238.1, ubiquitin carboxyl-terminal hydrolase MINDY-1-like [Dendronephthya gigantea]
Species abbreviation PPAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6PDI6Ubiquitin carboxyl-terminal hydrolase MINDY-2 OS=Mus musculus OX=10090 GN=Mindy2 PE=1 SV=1
A3KQS4Ubiquitin carboxyl-terminal hydrolase MINDY-1 OS=Danio rerio OX=7955 GN=mindy1 PE=3 SV=1
Q8NBR6Ubiquitin carboxyl-terminal hydrolase MINDY-2 OS=Homo sapiens OX=9606 GN=MINDY2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005631 (this species only)
Ubiquitin familyDUB|MINDY|MINDY · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04424
all species →		MINDY_DUBMINDY deubiquitinaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007518
all species →		FamilyMINDY deubiquitinaseInterproscan
IPR033979
all species →		DomainMINDY deubiquitinase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18063
all species →		NF-E2 INDUCIBLE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004843
all species →		Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0016807
all species →		Molecular Functioncysteine-type carboxypeptidase activityInterproscan
GO:0071108
all species →		Biological Processprotein K48-linked deubiquitinationInterproscan
GO:0071944
all species →		Cellular Componentcell peripheryInterproscan
GO:1990380
all species →		Molecular FunctionK48-linked deubiquitinase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01309MINDY1_2; ubiquitin carboxyl-terminal hydrolase MINDY-1/2EC:3.4.19.12
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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