Detailed information of Ppa0G396790 in Paragorgia papillata

Genomic Location: Contig00577:1079137...1096200
NR annotation: CAB3993743.1, Hypothetical predicted protein [Paramuricea clavata]
Species abbreviation PPAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0JNA8PAX-interacting protein 1 OS=Bos taurus OX=9913 GN=PAXIP1 PE=2 SV=1
Q6ZW49PAX-interacting protein 1 OS=Homo sapiens OX=9606 GN=PAXIP1 PE=1 SV=2
Q6NZQ4PAX-interacting protein 1 OS=Mus musculus OX=10090 GN=Paxip1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001384 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00533
all species →
BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan
PF16589
all species →
BRCT_2BRCT domain, a BRCA1 C-terminus domainFamilyInterproscan
PF12738
all species →
PTCB-BRCTtwin BRCT domainFamilyInterproscan
PF16770
all species →
RTT107_BRCT_5Regulator of Ty1 transposition protein 107 BRCT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036420
all species →
Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR001357
all species →
DomainBRCT domainInterproscan
IPR051579
all species →
FamilyDNA Damage Response and Transcriptional RegulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23196
all species →
PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →
Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G396790.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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