Gene detail

Detailed information of Ppa0G396910 in Paragorgia papillata

Genomic Location: Contig00577:1198575...1205720
NR annotation: XP_028394009.1, uncharacterized protein LOC114518246 [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Ppa0G396910

ATGTCGTTTGCAACTTTAAGTAATACGTTAGACGAATGTTCGGCCATATCTAAACTAGAATTGACGAGAAATCCATTCGATGGAATGGAGGAACGACTAAATCTGCCATCTTTGTCAAGTCCTTCGATATTCACCAAACAAGAGACACCAGGCAGCCAAAAGAAGAAAGGATTCCGATGGTCCATTGATCAGATATCTAAATTGAATCCAGCTGATATTGATGAATTTCCCAATCAAGAATACAGCAGTACATACGAGAGGCCAGAGGATGAAACTAGAGCCCAAGAAGCTATCAATGAGTATTTTTCACACGGCACCATCTTACCGTCGCCATGGACACCTGAAAATCACGTCAAACACGTGAGGTTTTCACCATTACCTCCCACGACTACCTACATCAGCGGAGAAGATGACAGCATGACTGACGTTTCTCATAACTCAGGAAACCAATCAGCACGAACTTCAAGACAAATCGTCGATGCTGGTTGTCAAACTTTGTTAACATTCCCTCCATCATTTGATCTCAGTAAGATTGTTGATTCCGGATTTTATTCGTACAGTGAAGACGAAGGAAGCTTGACTGGAAGAGATTTAAATGTTTCGTCGTTGAGACGTAAACTGTTTAGTCAGGATGAACAAAATTCGCCCATGAAACCAACTCCTGAGCAATTATCTAAACCAAAAATAACAAGGTCCATTTTGAAAAGCCCAAGTCCCAGTTTGTTAACTTCGAGTCCTTTAAAAGGTCGTGGCTATCTCCACCCAGACCTGCATGATTCACCATTCTCAATCAACAGTTATAGTAGAACGTCTCAAAGTCCTGGCATATCTCCCATCAAACCACCACCAGCTCTGCATACCCAACATCCTGCTTTAGAAGAGTCTGAGGTTCAACATGATGGTACATTATCTAATGATGACGTGTTCACTAGCCATATTCTCGAGTCTTCTGATGTATGCATTGACCATGTTTTAATTCCCGACGTGTCTCCTATTAAAAACCCGAATGCGCATGGCACAAAGTCCGCTGACCAACACGATGACGGCTCCGAGGAAGAGTATGATGCCAAGGGAGATCTTCCCGAGCGAGACGAGAAACTGAGTGATGGTGGACCCATGAAAATCTCCGAACTCAGTATGGTCGAAATGGATTACGAAAACGAAGACGAAAATAACAGTAGCGAAATGGACATGGCGGAACTTCAACCCCCCACTTCATCGAACCCGACGATACAGATCGATCATCACGACGAGTTTGCGTCGAACCGCGTCGAAACACGTGGTCTTTCAAATGACGTCGTTCCTAAAATTAATGATGACGTTATTTCTAAAAATAGCGACGACGTTACTCGTGACGTCATTGTTGATGCAAACGATGACGTCATTGATGCCAAACGTGTTGAAGCTACGGTTGGATCTAACGTTGGTGGACTGTTTGGAGGACATGCGGGATTGAAGTGGAAAAGAAGGGATCCTGCGGACACTGGGAGACAAAGACGAGAGAATAGGGACAATTGGGGATCTAGTAAGGAGAATAAGGAGGGGGATATGTATGGCCATTATCCCGACAAGGGGTACGAGAGTCGAGGAAATGGTGATGAGGACTTGTTAAAGAGAGCTTCAGCCGCTATGAAGCGAGCAGATAAAGTGGTTCAGGAGACGTGCTTGCAGCAAGGAAAAATCCCTAAGAGGACTGGCACTAGCCTTGGCCTTCTAAACTGGAGCAGCGTGGATGGTGCGTCGTCATGGCATCCGATTGACATGTCGACGCCTGTTGTCAGCGACAAATTTAAGAACAAACCGCTGGTCTTGCCGACTACGGACGCGTCTAGCATACGACATCATCAAGTCTCGGACCTAGACTCCTATAATAATCTTTTGAGCTCGTTCGCGAAATCCAGGCTGGACCAGGGCCAGCGATCACATGGTCCAGTGGACTCCACCGCAGAGAACCTACTATCTTCTGATTTAAGAAATCGAGCGCGAACCACGGGACTGGAAACTAGAGCACGGAGAAGTTTAAATGACATTAGTAAGAACCACTGA

Transcript

Ppa0G396910

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5U3U6	Protein aurora borealis OS=Danio rerio OX=7955 GN=bora PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004467 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15280 all species →	BORA_N	Protein aurora borealis N-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023252 all species →	Family	Aurora borealis protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14728 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007088 all species →	Biological Process	regulation of mitotic nuclear division	Interproscan
GO:0019901 all species →	Molecular Function	protein kinase binding	Interproscan
GO:0032147 all species →	Biological Process	activation of protein kinase activity	Interproscan
GO:0060236 all species →	Biological Process	regulation of mitotic spindle organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Ppa0G396910.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.