Detailed information of Ppa0G402260 in Paragorgia papillata

Genomic Location: Contig00582:44845...53730
NR annotation: CAB3993714.1, methionyl-tRNA formyltransferase, mitochondrial-like [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B0S140Methionyl-tRNA formyltransferase OS=Finegoldia magna (strain ATCC 29328 / DSM 20472 / WAL 2508) OX=334413 GN=fmt PE=3 SV=1
B8CWS7Methionyl-tRNA formyltransferase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=fmt PE=3 SV=1
A4SFP1Methionyl-tRNA formyltransferase OS=Chlorobium phaeovibrioides (strain DSM 265 / 1930) OX=290318 GN=fmt PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003249 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02911
all species →		Formyl_trans_CFormyl transferase, C-terminal domainDomainInterproscan
PF00551
all species →		Formyl_trans_NFormyl transferaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005793
all species →		DomainFormyl transferase, C-terminalInterproscan
IPR002376
all species →		DomainFormyl transferase, N-terminalInterproscan
IPR011034
all species →		Homologous_superfamilyFormyl transferase-like, C-terminal domain superfamilyInterproscan
IPR005794
all species →		FamilyMethionyl-tRNA formyltransferaseInterproscan
IPR041711
all species →		DomainMethionyl-tRNA formyltransferase, N-terminal domainInterproscan
IPR036477
all species →		Homologous_superfamilyFormyl transferase, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11138
all species →		METHIONYL-TRNA FORMYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004479
all species →		Molecular Functionmethionyl-tRNA formyltransferase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0071951
all species →		Biological Processconversion of methionyl-tRNA to N-formyl-methionyl-tRNAInterproscan
GO:0009058
all species →		Biological Processbiosynthetic processInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G402260.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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