Detailed information of Ppa0G406220 in Paragorgia papillata

Genomic Location: Contig00587:903266...911398
NR annotation: CAB4025018.1, tripartite motif-containing 2-like isoform X3, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P82457E3 ubiquitin-protein ligase Midline-1 OS=Mus spretus OX=10096 GN=Mid1 PE=2 SV=1
Q5C8U3Tripartite motif-containing protein 5 OS=Chlorocebus tantalus OX=60712 GN=TRIM5 PE=2 SV=1
Q587N7Tripartite motif-containing protein 5 OS=Chlorocebus aethiops OX=9534 GN=TRIM5 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07534TLDTLDDomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR006571DomainTLDc domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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