Genomic Location: Contig00587:1942690...1970218
NR annotation: CAB3987607.1, CCR4-NOT transcription complex subunit 1 isoform X5 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families
| CDS |
| Ppa0G406780 |
| Transcript |
| Ppa0G406780 |
| Protein |
| Ppa0G406780 |
| UniProt accession | Description |
|---|---|
| A0JP85 | CCR4-NOT transcription complex subunit 1 OS=Xenopus tropicalis OX=8364 GN=cnot1 PE=2 SV=1 |
| A1A5H6 | CCR4-NOT transcription complex subunit 1 OS=Danio rerio OX=7955 GN=cnot1 PE=2 SV=1 |
| Q6ZQ08 | CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002577 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16417 all species → | CNOT1_TTP_bind | CCR4-NOT transcription complex subunit 1 TTP binding domain | Repeat | Interproscan |
| PF00071 all species → | Ras | Ras family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001806 all species → | Family | Small GTPase | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR032193 all species → | Domain | CCR4-NOT transcription complex subunit 1, TTP binding domain | Interproscan |
| IPR040398 all species → | Family | CCR4-NOT transcription complex subunit 1 | Interproscan |
| IPR038535 all species → | Homologous_superfamily | CCR4-NOT subunit 1, TTP binding domain superfamily | Interproscan |
| IPR005225 all species → | Domain | Small GTP-binding protein domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13162 all species → | CCR4-NOT TRANSCRIPTION COMPLEX | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003924 all species → | Molecular Function | GTPase activity | Interproscan |
| GO:0005525 all species → | Molecular Function | GTP binding | Interproscan |
| GO:0000288 all species → | Biological Process | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | Interproscan |
| GO:0000932 all species → | Cellular Component | P-body | Interproscan |
| GO:0017148 all species → | Biological Process | negative regulation of translation | Interproscan |
| GO:0030015 all species → | Cellular Component | CCR4-NOT core complex | Interproscan |
| GO:0060090 all species → | Molecular Function | molecular adaptor activity | Interproscan |
Ppa0G406780.
