Genomic Location: Contig00587:2596073...2602629
NR annotation: CAB4017491.1, tripartite motif-containing 2-like isoform X3 [Paramuricea clavata]
| CDS | ||||
| Ppa0G407190 | ||||
| Transcript |
| Ppa0G407190 |
| Protein |
| Ppa0G407190 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| P82457 | E3 ubiquitin-protein ligase Midline-1 OS=Mus spretus OX=10096 GN=Mid1 PE=2 SV=1 | |||
| Q03601 | RING finger protein nhl-1 OS=Caenorhabditis elegans OX=6239 GN=nhl-1 PE=1 SV=2 | |||
| Q8R0K2 | E3 ubiquitin-protein ligase TRIM31 OS=Mus musculus OX=10090 GN=Trim31 PE=1 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07534 | TLD | TLD | Domain | Interproscan |
| PF00643 | zf-B_box | B-box zinc finger | Domain | Interproscan |
| PF13445 | zf-RING_UBOX | RING-type zinc-finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000315 | Domain | B-box-type zinc finger | Interproscan |
| IPR006571 | Domain | TLDc domain | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR047153 | Family | TRIM45/56/19 | Interproscan |
| IPR027370 | Domain | Zinc finger, RING-type, eukaryotic | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR25462 | BONUS, ISOFORM C-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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