Genomic Location: Contig00587:2794765...2808568
NR annotation: XP_028392351.1, CCR4-NOT transcription complex subunit 1-like isoform X2 [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families
| CDS |
| Ppa0G407300 |
| Transcript |
| Ppa0G407300 |
| Protein |
| Ppa0G407300 |
| UniProt accession | Description |
|---|---|
| A0JP85 | CCR4-NOT transcription complex subunit 1 OS=Xenopus tropicalis OX=8364 GN=cnot1 PE=2 SV=1 |
| Q6ZQ08 | CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1 PE=1 SV=2 |
| A5YKK6 | CCR4-NOT transcription complex subunit 1 OS=Homo sapiens OX=9606 GN=CNOT1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001179 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07647 all species → | SAM_2 | SAM domain (Sterile alpha motif) | Domain | Interproscan |
| PF16417 all species → | CNOT1_TTP_bind | CCR4-NOT transcription complex subunit 1 TTP binding domain | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013761 all species → | Homologous_superfamily | Sterile alpha motif/pointed domain superfamily | Interproscan |
| IPR001660 all species → | Domain | Sterile alpha motif domain | Interproscan |
| IPR040398 all species → | Family | CCR4-NOT transcription complex subunit 1 | Interproscan |
| IPR038535 all species → | Homologous_superfamily | CCR4-NOT subunit 1, TTP binding domain superfamily | Interproscan |
| IPR032193 all species → | Domain | CCR4-NOT transcription complex subunit 1, TTP binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13162 all species → | CCR4-NOT TRANSCRIPTION COMPLEX | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0000288 all species → | Biological Process | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | Interproscan |
| GO:0000932 all species → | Cellular Component | P-body | Interproscan |
| GO:0017148 all species → | Biological Process | negative regulation of translation | Interproscan |
| GO:0030015 all species → | Cellular Component | CCR4-NOT core complex | Interproscan |
| GO:0060090 all species → | Molecular Function | molecular adaptor activity | Interproscan |
Ppa0G407300.
