Genomic Location: Contig00587:3050722...3055505
NR annotation: CAH3163342.1, unnamed protein product [Pocillopora meandrina]
Species Paragorgia papillata · all data for this species · gene families
| CDS |
| Ppa0G407460 |
| Transcript |
| Ppa0G407460 |
| Protein |
| Ppa0G407460 |
| UniProt accession | Description |
|---|---|
| A0JP85 | CCR4-NOT transcription complex subunit 1 OS=Xenopus tropicalis OX=8364 GN=cnot1 PE=2 SV=1 |
| Q6ZQ08 | CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1 PE=1 SV=2 |
| A5YKK6 | CCR4-NOT transcription complex subunit 1 OS=Homo sapiens OX=9606 GN=CNOT1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000237 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12012 all species → | DUF3504 | Domain of unknown function (DUF3504) | Family | Interproscan |
| PF16417 all species → | CNOT1_TTP_bind | CCR4-NOT transcription complex subunit 1 TTP binding domain | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR021893 all species → | Domain | Domain of unknown function DUF3504 | Interproscan |
| IPR052787 all species → | Family | Mitochondrial antiviral-signaling domain-containing protein | Interproscan |
| IPR038535 all species → | Homologous_superfamily | CCR4-NOT subunit 1, TTP binding domain superfamily | Interproscan |
| IPR032193 all species → | Domain | CCR4-NOT transcription complex subunit 1, TTP binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21446 all species → | DUF3504 DOMAIN-CONTAINING PROTEIN | Interproscan |
Ppa0G407460. This gene does have a gene model — the search simply returned no hit.Ppa0G407460.
