Gene detail

Detailed information of Ppa0G408750 in Paragorgia papillata

Genomic Location: Contig00588:1910750...1911175
NR annotation: CAB4015220.1, E3 ubiquitin- ligase TRIM56-like [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5ZMD4	Tripartite motif-containing protein 59 OS=Gallus gallus OX=9031 GN=TRIM59 PE=2 SV=1
Q922Y2	Tripartite motif-containing protein 59 OS=Mus musculus OX=10090 GN=Trim59 PE=1 SV=2
Q503I2	Tripartite motif-containing 13 OS=Danio rerio OX=7955 GN=trim13 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13445	zf-RING_UBOX	RING-type zinc-finger	Domain	Interproscan
PF00643	zf-B_box	B-box zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027370	Domain	Zinc finger, RING-type, eukaryotic	Interproscan
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR047153	Family	TRIM45/56/19	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR25462	BONUS, ISOFORM C-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0006513	Biological Process	protein monoubiquitination	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan