Detailed information of Ppa0G409740 in Paragorgia papillata

Genomic Location: Contig00588:3694121...3725501
NR annotation: CAB3977809.1, von Willebrand factor D and EGF domain-containing [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q28178Thrombospondin-1 OS=Bos taurus OX=9913 GN=THBS1 PE=2 SV=2
P35441Thrombospondin-1 OS=Mus musculus OX=10090 GN=Thbs1 PE=1 SV=1
P07996Thrombospondin-1 OS=Homo sapiens OX=9606 GN=THBS1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF07974EGF_2EGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR050969FamilyDevelopmental Signaling ModulatorsInterproscan
IPR048287DomainThrombospondin-like, N-terminal domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR008993Homologous_superfamilyTissue inhibitor of metalloproteinases-like, OB-foldInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013111DomainEGF-like domain, extracellularInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14949EGF-LIKE-DOMAIN, MULTIPLE 7, 8Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005102Molecular Functionsignaling receptor bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan

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