Genomic Location: Contig00589:341087...357761
NR annotation: CAB3985677.1, vacuolar sorting-associated 53 homolog [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families
| CDS |
| Ppa0G410340 |
| Transcript |
| Ppa0G410340 |
| Protein |
| Ppa0G410340 |
| UniProt accession | Description |
|---|---|
| Q5ZLD7 | Vacuolar protein sorting-associated protein 53 homolog OS=Gallus gallus OX=9031 GN=VPS53 PE=2 SV=1 |
| Q5VIR6 | Vacuolar protein sorting-associated protein 53 homolog OS=Homo sapiens OX=9606 GN=VPS53 PE=1 SV=2 |
| Q5R5J4 | Vacuolar protein sorting-associated protein 53 homolog OS=Pongo abelii OX=9601 GN=VPS53 PE=2 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004027 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04100 all species → | Vps53_N | Vps53, N-terminal | Repeat | Interproscan |
| PF16854 all species → | VPS53_C | Vacuolar protein sorting-associated protein 53 C-terminus | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR038260 all species → | Homologous_superfamily | Vps53, C-terminal domain superfamily | Interproscan |
| IPR039766 all species → | Family | Vacuolar protein sorting-associated protein 53 | Interproscan |
| IPR007234 all species → | Domain | Vps53, N-terminal | Interproscan |
| IPR031745 all species → | Domain | Vps53, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12820 all species → | VACUOLAR SORTING PROTEIN 53 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000938 all species → | Cellular Component | GARP complex | Interproscan |
| GO:0042147 all species → | Biological Process | retrograde transport, endosome to Golgi | Interproscan |
Ppa0G410340.
