Gene detail

Detailed information of Ppa0G411280 in Paragorgia papillata

Genomic Location: Contig00589:2023584...2027851
NR annotation: CAB3987792.1, X-box-binding 1-like [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q9R1S4	X-box-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Xbp1 PE=2 SV=1
P17861	X-box-binding protein 1 OS=Homo sapiens OX=9606 GN=XBP1 PE=1 SV=2
O35426	X-box-binding protein 1 OS=Mus musculus OX=10090 GN=Xbp1 PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	TF_bZIP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00170	bZIP_1	bZIP transcription factor	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046347	Homologous_superfamily	Basic-leucine zipper domain superfamily	Interproscan
IPR052470	Family	Endoplasmic Reticulum Stress-Regulated Transcription Factor	Interproscan
IPR004827	Domain	Basic-leucine zipper domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46542	X-BOX BINDING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006990	Biological Process	obsolete positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09027	XBP1; X box-binding protein 1	-	Transcription factors	ko03000	deepkoala