Detailed information of Ppa0G411780 in Paragorgia papillata

Genomic Location: Contig00589:2628095...2630588
NR annotation: CAB4018219.1, Mitochondrial ubiquitin ligase activator of NFKB 1 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8VCM5Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Mus musculus OX=10090 GN=Mul1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008583 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13920
all species →		zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF12483
all species →		GIDEE3 Ubiquitin ligaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR022170
all species →		DomainE3 Ubiquitin ligase MUL1-likeInterproscan
IPR051652
all species →		FamilyMDM2/MDM4 and MUL1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12183
all species →		MITOCHONDRIAL UBIQUITIN LIGASE ACTIVATOR OF NFKB 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0006996
all species →		Biological Processorganelle organizationInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15688MUL1; E3 ubiquitin-protein ligase MUL1EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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