Gene detail

Detailed information of Ppa0G412370 in Paragorgia papillata

Genomic Location: Contig00590:300366...302071
NR annotation: CAB3979372.1, TNF receptor-associated factor 6 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q557K0	TNF receptor-associated factor family protein DDB_G0273433/DDB_G0273509 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0273433 PE=3 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|U-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13923	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan
PF13854	Kelch_5	Kelch motif	Repeat	Interproscan
PF13418	Kelch_4	Galactose oxidase, central domain	Repeat	Interproscan
PF01344	Kelch_1	Kelch motif	Repeat	Interproscan
PF02176	zf-TRAF	TRAF-type zinc finger	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001293	Domain	Zinc finger, TRAF-type	Interproscan
IPR015915	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR006652	Repeat	Kelch repeat type 1	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45632	LD33804P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan