Gene detail

Detailed information of Ppa0G413000 in Paragorgia papillata

Genomic Location: Contig00590:924870...928992
NR annotation: XP_046841478.1, actin-related protein 2/3 complex subunit 3-like [Xenia sp. Carnegie-2017]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9JM76	Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE=1 SV=3
A1DPK7	Actin-related protein 2/3 complex subunit 3-A OS=Xenopus laevis OX=8355 GN=arpc3-a PE=1 SV=1
Q3T035	Actin-related protein 2/3 complex subunit 3 OS=Bos taurus OX=9913 GN=ARPC3 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007562 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04062 all species →	P21-Arc	ARP2/3 complex ARPC3 (21 kDa) subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007204 all species →	Family	Actin-related protein 2/3 complex subunit 3	Interproscan
IPR036753 all species →	Homologous_superfamily	Actin-related protein 2/3 complex subunit 3 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12391 all species →	ARP2/3 COMPLEX 21 KD SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan
GO:0005885 all species →	Cellular Component	Arp2/3 protein complex	Interproscan
GO:0034314 all species →	Biological Process	Arp2/3 complex-mediated actin nucleation	Interproscan
GO:0030833 all species →	Biological Process	regulation of actin filament polymerization	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05756	ARPC3; actin related protein 2/3 complex, subunit 3	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.