Gene detail

Detailed information of TcoG001392.mRNA1 in Tubastraea coccinea

Genomic Location: ptg000053l:918458...929521
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01588 all species →	tRNA_bind	Putative tRNA binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR051270 all species →	Family	Tyrosine-tRNA ligase and regulatory protein	Interproscan
IPR002547 all species →	Domain	tRNA-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11586 all species →	TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000049 all species →	Molecular Function	tRNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15437	AIMP1, ARC1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1	-	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.