Detailed information of TcoG006045.mRNA1 in Tubastraea coccinea

Genomic Location: ptg000258l:939823...960335
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20470
all species →
HTH_61Helix-turn-helix domainDomainInterproscan
PF00271
all species →
Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF21099
all species →
POLQ_helicalDNA_pol_Q helicase like region helical domainDomainInterproscan
PF00270
all species →
DEADDEAD/DEAH box helicaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014001
all species →
DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR050474
all species →
FamilyHelicase Hel308/SKI2Interproscan
IPR046931
all species →
DomainDNA polymerase theta-like, helix-turn-helix domainInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001650
all species →
DomainHelicase, C-terminal domain-likeInterproscan
IPR048960
all species →
DomainPOLQ-like, helical domainInterproscan
IPR036390
all species →
Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR011545
all species →
DomainDEAD/DEAH box helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47961
all species →
DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for TcoG006045.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP