Gene detail

Detailed information of TcoG007133.mRNA1 in Tubastraea coccinea

Genomic Location: ptg000308l:455242...463327
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00828 all species →	Ribosomal_L27A	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005749 all species →	Family	Large ribosomal subunit protein uL15, bacterial-type	Interproscan
IPR030878 all species →	Family	Large ribosomal subunit protein uL15	Interproscan
IPR021131 all species →	Domain	Large ribosomal subunit protein uL15/eL18	Interproscan
IPR036227 all species →	Homologous_superfamily	Large ribosomal subunit protein uL15/eL18 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12934 all species →	50S RIBOSOMAL PROTEIN L15	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005762 all species →	Cellular Component	mitochondrial large ribosomal subunit	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0015934 all species →	Cellular Component	large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02876	RP-L15, MRPL15, rplO; large subunit ribosomal protein L15	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.