Gene detail

Detailed information of TcoG009379.mRNA1 in Tubastraea coccinea

Genomic Location: ptg000427l:280704...289124
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

TcoG009379.mRNA1

AGTTTTTTGCAGCAAGTTTGGACGCGCTCTCCACACAAAATGGTTGTTCCTCAATCTCCGTGGGTTGTTCGCTATATCATCTTCGTGGGAGCCGCGGTGCTGTTTTGCTTTCAAATTGCAAATGTTTCACCCACCGAGAGCCCAGGGGGAATCGTGACGAAACAAACATCGCACAGCAGTCAAGGAATTGCTAACGAAAAAGCTTTGTCAAGCCTCGAGAATTTAAAAGGGGCCGATAATGGCTCGGATTCGTTAAACCCAGCAGAGAGTTGGAACTTCTTTAGAAAACGGGGCAGCAAAACGAACAAAGGAAAGGACAAGAAACACAACAAGGAATCCTCTAAGAATCAGTGTGACCCCAGCCCTGGTCCCCCAGGCCCTCAAGGTCCACCCGGTCCAGTCGGGCCGCCTGGAGCCCAGATCACCGAGGCCACCATGATGGCGGAGTTCAGGAGCATGGTGCAGGAAAGCGCGAATCGACGATCAAGGCGTATTGCAGATCAGAACATCAGCCTGATGGCAGCAGGAATCCCTGATCTTCTGTCTGCGCATCATGTCGTCCTTCGACACGACGCGGTGATTTCAAAGAAGTCGCACCAAGAATTGAAAAACTACAAGCAGCCTGGTGACCATGCTGGGACGTTTGTACGCGGGAATGATCTTGATGTGCGCTCCGGTCGATATTCCATCCGGTACAGCGGTGTGTACCAACTCACAGCCAATCTGCTGATATCACGTGACCGAGAAGCAAATCTGCGCCCGCGAGACTATGTGAAAATCAGCATCTGCATCAGTTCACTGTGTGAATTGAACACGTCTTTAACAACAATAACAGGAATGGAAAGCAACAGCCTCAGGTTTACAGTGTCAGTGAGTGGAATGCTAATGCTCAAGGCCGGGCATTATGTATCGATATACATCGAAAACAACACCAACAAACCCATCAGCATCTTGGAGAAGACCTCGTTTTCTGGACTTATGATTGGTCGCTAACATGATGACGTAACAGAGAGTGCATCACGAAGAGTTGGAAAACAGGGTCTTAAAACTTGAACTGAACTGAACACGCTCGGCGCTCTCTGTTTAGATTTAAACTGATGGCTTAAACACAGAAAACATATTCTTCTATATTTCACAGTATTATAGGAGTATGATTTCTCAAGAAGTCACATTAATGATAAATGCTATCATTAAGGTTGTTTTGGCATCATTTTGCTCTTTTTTCATATAAGTGCCATAAGATGTATATATGCGAATCCTGTGTCAAATCGTGCAAAAACTACAGCCTCGTGCGTGTTTTGAAGTTTCACTCTTTAGATTCAAAATGACGTACACCTCAACGTACTAAGATAGCCATGGCGAAAAAAAAACTGCGGCTGTAACCTTAGATATTTTCCCTCTATAACAGAAAAAGAAAAACTACATGCGTACTGCTACAGTAACACTTTCTCGATCCCTTAGAGTCTTGTCTGGTCCCCACACCCTTCCGCTAAACATAACTTTGGTCTTCATCTGAAACGGTTCGTATTGCGAATGATAATTTAGTCCCTTGTATTTTGACTTTCAATTTCTGCTTCCTGTTAATTAGTAGTTTCCGAAATATAGAATTGTCATGTGCAGTACGACAGTTATCATTAAGAGGGTGGGTGcggggacgctgatttccctttcggtaaacaagcgatgccatttttaacggtcgatgccatcattagcattcattggtaaccaggccttttgtaatggtcgatgccatttctgtcttgtttatgcttagattgggatgaaagtaggctattattattagataaaactgggtttaggtaaagcgttattagatctaagctagattcgcgattacgctagatctagggatagggttagggttatagatgtatcattaagaaaagcaccttttatatttaaatttttcttgggtttgccggatcaacccagtggtctagtggtgaaggaggggtgttagcatgcagaggttccgggttggattctaggtaattaattgcatttttctttttctgatcgaaaaaataattcgaaaatttgtcgtgaaaatGATACGCTTGTTTACGAAAGGGAAAATTGCTGCGGGACAGACTACACAACGTCATACCGCTGATAAATGAACGAAGGCTCTGGATTGAGAATTCTCGATCTTAGAGGCCTCCTATTTATAGTTTAGGTTTGAAAATTCTCCACAGCCATGTTTATGCATAGTTCTTCTAAGGTATGCAAGTGTCAAAATATCTGAGCTTCTCCATGATTGGGAAATAAAGCATTATTTAACCAGGAGCAGAAGGTACATCTTTGTTGATTCGTGGTTTGGATTTCACGCTGCTTGCGTGACCATTGTTCTCCGATAAAGTGTTTTCTTTTCTTTTATTATTTGCTTTGTTCTGATTACTGAGCCAATTTTGATCACTTTGGTTTGATCATTAGAAAACTTGGAAAACCACTCTAGTCACTCTAGTTCTTGTCATTTCGAATTTCTTTGTTTACTAGAATGATCATTTCCCGACATTTTTTTCTTTTTTAAAAGTACataataataataataataataataataatTTAATACTGGTTGTGCATTTTCTCTGATATATTCAAATGCGCATTACAATCATAAATTGTAAATAAGTTTAAAAAATATATACGTCAAGAGTAACACTATAATTAAGTAAGTAAGACTTTACAAAGGCTTTACCAAATAAAACAAACCAA

Protein

Pfam domain

No Pfam domain signature was detected for TcoG009379.mRNA1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR001073 all species →	Domain	C1q domain	Interproscan
IPR052136 all species →	Family	Adipolin/Erythroferrone-related	Interproscan
IPR008983 all species →	Homologous_superfamily	Tumour necrosis factor-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24019 all species →	ADIPOLIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005179 all species →	Molecular Function	hormone activity	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21410	C1QTNF12, FAM132A; adipolin	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.