Gene detail

Detailed information of TcoG009436.mRNA1 in Tubastraea coccinea

Genomic Location: ptg000433l:592661...600400
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10451 all species →	Stn1	Telomere regulation protein Stn1	Domain	Interproscan
PF09170 all species →	STN1_2	CST, complex subunit STN1, C terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR040260 all species →	Family	Replication factor A protein-like	Interproscan
IPR018856 all species →	Domain	CST complex subunit Stn1, N-terminal	Interproscan
IPR042082 all species →	Homologous_superfamily	CST complex subunit Stn1, wHTH1 motif superfamily	Interproscan
IPR015253 all species →	Domain	Stn1, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13989 all species →	REPLICATION PROTEIN A-RELATED	Interproscan

Gene Ontology

No Gene Ontology signature was detected for TcoG009436.mRNA1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23312	STN1; CST complex subunit STN1	-	DNA replication proteins	ko03032	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.