Gene detail

Detailed information of TcoG010776.mRNA1 in Tubastraea coccinea

Genomic Location: ptg000504l:168709...177924
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06400 all species →	Alpha-2-MRAP_N	Alpha-2-macroglobulin RAP, N-terminal domain	Domain	Interproscan
PF06401 all species →	Alpha-2-MRAP_C	Alpha-2-macroglobulin RAP, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036744 all species →	Homologous_superfamily	RAP domain superfamily	Interproscan
IPR038003 all species →	Family	Alpha-2-macroglobulin receptor-associated protein	Interproscan
IPR009066 all species →	Domain	Alpha-2-macroglobulin receptor-associated protein, domain 1	Interproscan
IPR010483 all species →	Domain	Alpha-2-macroglobulin RAP, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16560 all species →	ALPHA-2-MACROGLOBULIN RECEPTOR-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0012505 all species →	Cellular Component	endomembrane system	Interproscan
GO:0048019 all species →	Molecular Function	receptor antagonist activity	Interproscan
GO:0048259 all species →	Biological Process	regulation of receptor-mediated endocytosis	Interproscan
GO:0050750 all species →	Molecular Function	low-density lipoprotein particle receptor binding	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0008201 all species →	Molecular Function	heparin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22290	LRPAP1; alpha-2-macroglobulin receptor-associated protein	-	Cholesterol metabolism	ko04979	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.