Detailed information of TcoG011558.mRNA1 in Tubastraea coccinea

Genomic Location: ptg000562l:1041618...1041851
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13923
all species →
zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR045134
all species →
FamilyUHRF1/2-likeInterproscan
IPR017907
all species →
Conserved_siteZinc finger, RING-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14140
all species →
E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0010216
all species →
Biological Processobsolete negative regulation of gene expression via chromosomal DNA cytosine methylationInterproscan
GO:0016567
all species →
Biological Processprotein ubiquitinationInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for TcoG011558.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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