Gene detail

Detailed information of TcoG014543.mRNA1 in Tubastraea coccinea

Genomic Location: ptg000717l:1779015...1808581
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06584 all species →	DIRP	DIRP	Family	Interproscan
PF19438 all species →	LIN9_C	LIN9 C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010561 all species →	Family	Protein LIN-9/Protein ALWAYS EARLY	Interproscan
IPR033471 all species →	Domain	DIRP domain	Interproscan
IPR045831 all species →	Domain	LIN-9, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21689 all species →	LIN-9	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000003 all species →	Biological Process	obsolete reproduction	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005654 all species →	Cellular Component	nucleoplasm	Interproscan
GO:0006351 all species →	Biological Process	DNA-templated transcription	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0017053 all species →	Cellular Component	transcription repressor complex	Interproscan
GO:0051726 all species →	Biological Process	regulation of cell cycle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21773	LIN9; protein lin-9	-	Cellular senescence	ko04218	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.