Gene detail

Detailed information of TcoG015815.mRNA1 in Tubastraea coccinea

Genomic Location: ptg000794l:1128143...1131527
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12861 all species →	zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR024991 all species →	Domain	Anaphase-promoting complex subunit 11, RING-H2 finger	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR051031 all species →	Family	RING-box E3 Ubiquitin Ligase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11210 all species →	RING BOX	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005680 all species →	Cellular Component	anaphase-promoting complex	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0031145 all species →	Biological Process	anaphase-promoting complex-dependent catabolic process	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0097602 all species →	Molecular Function	cullin family protein binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0016567 all species →	Biological Process	protein ubiquitination	Interproscan
GO:0031461 all species →	Cellular Component	cullin-RING ubiquitin ligase complex	Interproscan
GO:0045842 all species →	Biological Process	positive regulation of mitotic metaphase/anaphase transition	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03358	APC11, ANAPC11; anaphase-promoting complex subunit 11	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.