Gene detail

Detailed information of TcoG016593.mRNA1 in Tubastraea coccinea

Genomic Location: ptg000845l:85452...93319
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

TcoG016593.mRNA1

GACGTGGGAAATCCGCAGTTCGAGGGCGTCCAtgttgttgtcgttgttgtgtagtcttgttTTAAACGAAGAAATAATTTAAACTGTGAGGCAAGCTGTTGAGGAAAAAACAAACATTGAGTAGTTAATTCCGCGGGCACTGAGTGCACAAGATGCATTCGAAAGGTTTCCATCGAGTCTTTCTGCCGAGCATTTTAGTGGCTTTCTTGTATTGCGGGCCGTGTTGCGTTTCTGCCGTCGATGAATCATACCAGTGTCCTTATGACATTCACGTGCAGAAAGGACAGATTATAAAAGCAAGAGAATCCGTGAATAATGGAGCAAAGTTCCTGAAACATTCCTACGTTTTCGACGCTCGAGAATGTTACAAGTTGTGTTGCGAGAGGAAATACTGCGATCTGGCTCAGATGCAGTATAAGAATTCCTCCGATGGATTCTACGTGCGAGTTGAGAAAATTTGTTACATGTTTCATTGCGGTGTGCCCAGTAAATGTTTCTTTGGAGAACACGATCACTATGCTACAATCAATTATGAAAGACCCGATGAGGAATTGTCGAACTTAGATGGCGATCAATATAAGATCCCCTCGATTAAAGTCAACAAACCTACTTGGCAGTCACAACATAGACCTTCGGAGGCAAAAGGTGACGATGAGGAGAAAGATTTAGGATCAGAACCTGAAAAGCCTCCCCTCAAACCAGCAAAGGAAAATAAAGAGTACAATACAGACATACACAGTTCTTGGAACACAGAATCTGAAGATAAAAATGCAGATTATTCAAAGAAATTAAAAGAATCTGAAGAAGCAAGACACCATGTCAAGAACACAGAAAAACCTGTGTATCAAGAAGTTGTTACAAAGAAGCCTGAAACACCTACAAGAAAAATCCAGATTGAGACACAGGCTCCAGTGAAGAAAGTTACAGAAAAATCAAGAGTGCAACCACCTACACAAAAAGATGCTGATGATGCAGATGCTGACAATGCGGATGCTGAACTAGAGATGAAACTTGAAGAACTTACACCACCAGAGAAGCAACCTGATACAAAGACCGATCCACCCACATTTCATCACTGGAGAGAATTTGTTGACAATAACCCCAACTTTCCTTACACAATTCCTGTGAATCCGAAGGAAACCACACCTGAACCAACAACAAAGAAGCCGTATAAACAATCTACAACAGAGCACCATACTACAGAAAGAATAACAACTAGAAAGACAACTTTGaaaacaaagccacgcaaaacaacgccacgcaaaacaacagaaagAACTATCACAAAACCCACACCTCATGTAGACAATATGAATGATGAAATTGCACTAACAAAGCCTCCAGTACTGGAATTACCATTGCCACACAAGAATGTTTCAGATGTTGTTGTCATAGAAACACGCCATCTAAAGATCATTGAGAATAAGGCTGTGCTCCCGCTTGCAATTTTCCTGGTATTGGCCATTCTACTCCTGTTTGTTGTTGCACTGCGGCTCCGAATTGTCAAAAGCAAATTAAAAAGACGACCGTTTGCTACTGATGATGCAGATTACCTAATCAATGGAATGTACTTATAATTGACAATAATTCTGTATATCAATggggggagggccttaactgtaaggtggttgctatggaagagtttcaaatgtcatgtaattggtttcttaacttccttggctataatgtttgctcaccttccttctgttccatcaaattttataagtcacaccatattaatattttggttagtcatatgaccagggcataaaaacccttgaaactcaaacatcttacatttcatccgcccaaagaaacaatgtcaacggcttaagaacatcccaataaaaaaatctgttgcatggatttgttaaaattcatgttaaaaaagctgacatcataaaggtgaatttcatacattttcttttttcatcgaaacggtaattccatgctacagatgttaaaaaagttgaattgtgtatgattcaccagaaattggaattttaTCTCGTcatgtgcaatgtcagtttagtgatgtcttgtgttcagttttatagtttccaccatgttagcagtttacgaagtgagaaatgctaaccatgaaatattgtccctagcaacaactctaaaacagtagttaaggttcaccccccCCCCCCCCCCCTCCCTTAAATGGGACCAGGACAAATCAGATTCAAGAAGGATTCAAGACTGATTTTCACACAAATTCTCACACCCTTTTATATGCAACTGGTTTAAAATTCATCTGAGGTTGTTCTGAGCAAGACCATGTGATTAGATGGCCTGCATATTTACTAGCTCATAGAATCCTTGAGCTTTGAACTTGCAGtctaataccaaattcacaccagccgttaaacatgtttaactgttgtttagtttaactacggttttagcctctatcttgaacgtttttaaatgtatatgactcaaaccacctggaatggtaatgaaagtcaataacgttgcttttagtaaagatttcactcaaaatattaaggaacgtttaggggtatttttctaaacctatttcaaactaaacaacatttaaacatgtttaagcgttggtgtgaatgggTATAACTGCCAACTAACTACCAACACAGAAGCAACTTAATAGCTTGTTGTCCATTGTGTTTCATGGGTTTTCATGATTATTATCAATAGTTACCAGTATTATTAAATAATTTGCTAGTAAAGAGCAGGTTTTGTATTGAGTTTGGTAATTTAGCAAACATATTTGCCAATCAAAAGTTATAAATTATTATGCATCATGATATAAATATTTTTCTGTAATTTATAACTGGAACACCGATAATGATATTTGGTTGTATTTAGGAATTGTGGTTACAATAATCATAGCttaaagccaaacctgtaatataaaaggcagctggactgtccaactcatgcaaatgagcaaagtctaatgttcttgctcgtttgcatcagatttggcgtggggctttgttcttttataccgcaggttcacctttaaTGGTTAAAATAATGTCAATGTAATTATTTTGGTGGGTTTAATTATTTACTGGGAGTTTGTAGCGTTTTGTAACACTCTTAAGAGTGGTTTTATATTTGTGCTAAATATTTATTAGCATTTTttcctcgtgaattgagggccaaaggcccgagtgtagtgaggttTAGGGCAGTGGAATCTCAggttgcctcagcaattttaaagtgtaatacgttaacggtgttttagtcaccctgaagaagaccactaaatgtggtcaaaatataggtgtATGTTGATttggtgtcctgcaattgcctagcaacaaaaccgcgacAAAGCTCCAATTGACACCATCCAGTGTGATaagcgactgggaatgaaaatgtctcaacttcaaatttcgggagccattgtggccatgcaacccaacctctcaagtaaaattagaaattccatctccctcaaccacagcaaaaattttgcggtgcatcctcccccgagctgtgagaggttttgcaagacacatattttgtagtTACATTCATTTTGGCCTGAGAATCCTGCAGAATTTAGAGAATCATTACTAAAATACTGCTTCTGGACATCCATTTGTAGTTTGACTTATTGCACTCATAGGGCATTATTTGCCTAGGCTGTAATGTTATTAGAGCCttaaacaaggacactgactataaaaggaatagctctgcgccctctttgtcacactttcactgcttcaacagctaatgaaagatggctgacactgcaagcaacatggaggaagaccgttgcccaagaaataggtctgattctacctttactagttcaatcttgtataggatttatctttcatgaaaataaagctaaaaacgttatttgaatttatgcgccttttagcatgaatataatattttagctttccaaatttgaatttcgcgcagtaacggttctccattggcaagcggatgcacgtgatgttgacagttcggtgtcaagtgtgaaatgattggcggcttggccaggccaaggttcctttatagtcagtgtccttgtttaaGTAACTGTTCAGTAATGACCCAGTATTACTTTAAGAAACAAATGTTTAGTTTTAAATCTACAGTATGTTCTAGGTAGAGCAAAAATCTTGTCTACAGATCTCTTGTTTGGAGCCAAAGGAAGCTACCACTTATGCAAAAGAGATCTGGTGACAAAATTTGGTAACACATTTAGAAATGTGGATAAATGTAGGTGTGCCAGTGGGTTCATTTGTACAAGTAGCAAGCTAATAAATAAATGTTGACAACAAAGAGTGCTGACTGCAATAAAGTAGAGATATAAATACACACCAATCTCCAATCCACTGTGTTAAATAAAGAGGTGTGTTTAAAAAATGTTTATTTACCATCATTTTGATTCAAATGTCTAACTTGTGTTTCTTGATTGGGCAACCACCAACAAGGGTTGACACCACCCAAAACTATCCACAACCATCGATAAAACAACCCAAACTATCTGATTTGGAACTGATCAGATTGTTTTTGTTTTTTTTTTTTGCTTCTCAGAACAAACTGAATATTTTTTTTTGTTATTTGTAACATAATGCATTATACATAATGG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07502 all species →	MANEC	MANEC domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011106 all species →	Domain	Seven cysteines, N-terminal	Interproscan
IPR013980 all species →	Domain	MANSC domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46876 all species →	LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 11	Interproscan

Gene Ontology

No Gene Ontology signature was detected for TcoG016593.mRNA1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for TcoG016593.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.