Gene detail

Detailed information of TcoG019118.mRNA1 in Tubastraea coccinea

Genomic Location: ptg001010l:66...11974
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07815 all species →	Abi_HHR	Abl-interactor HHR	Family	Interproscan
PF14604 all species →	SH3_9	Variant SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR012849 all species →	Domain	Abl-interactor, homeo-domain homologous domain	Interproscan

PANTHER

No PANTHER signature was detected for TcoG019118.mRNA1. This gene does have a gene model — the search simply returned no hit.

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23649	ABI1; abl interactor 1	-	Salmonella infection	ko05132	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.