Gene detail

Detailed information of TcoG019986.mRNA1 in Tubastraea coccinea

Genomic Location: ptg001087l:32106...51942
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

TcoG019986.mRNA1

GAAGCCGATAAACATGGCGGACGGACGAGAGTGAAAAGCTTTTACAACGAAGATGGATTTGCTATGAGCCAAAGGATATTTGTGCGACGATGGATTATCCTAGTCTTACTTTTGATGATCTCTATCACCTTTCTATTCCTGCAGTTATTATCCCTGAAAGCAATCGATAACACGGTCATATCTAGGTTCAAAGTCTTAGAAAGTCTTCGAGGTTTACTTCCATACCAAAATCAAAGGAAACTTGTGCTGAGACACTTGAATACCTTTTCAGAAGTGTGCAAGGAACATGGGGTTCCAACATTTTTGTTTCATCCATCACTTGCTTCTTTACCAACAAGGAACTCAAATAAGTTTCAAGGAGATGATCAATGTGAACTGCTTTGCAGCTATAAGTATTTTGTATTTGGTGTAACAAGTTCAGCATGGCAGAAAGGTCAAAGTCAAGCACTATCAACATTGATATCCCAGTTGAGTGCTGATCTTCACTCAAAAGGTTTCGAAACTGTCTGTCACAATGTTCAAGAGCCATGGTTTAACTCGAGAAAAGATTTCATGAATATTAAGTTAATTGTTTCATCGTGCAGCATATCTCTGGGTGACACTGCTGTGGAGCTGTTAATATTTCATGACAGGAATTCGTATCTTTGGCATGGACCACTTCAGGGAGCTCCTGACGTCAAATTTGCAAAATATTCTGAAGCGTTCAACAGGTTCTCCATTAAGGGAAAATTTATCGATGGAATACATCTGAATATCCCAGCTGATCCTGACAAGCTAGTTTCAGAGCGAAAGCAGTCGCAGTTTAAGGGATGTAACATTACAAACGCTCAGCAGTTTTACAGTAAATATGGCAGAGATGTCTCCCCGGATGCTGTTCTGTTTAAGAGTAAAGCGATAGAAGTTCTGTCCGCGGCTATCAATGCTCTGGATCGTCTTGGTGTTAGATTCTGGCTAAGCAGTGGCACATGTTTAGGTTGGTTCCGGCAGTGCGATATCATTCCTCACAGTAAAGATGTTGACATTGGTATATGGATCAAAGACTATAACCCCCTTCTTATATCAGAGTTTGAGAAAAGTGGGCTGCTTTTAAAACATAAATTTGGTCGCATAGAAGATAGTTTTGAGTTGTCCTTCAGGACGAAAGAGGACTTTGTCAAGTTAGACATTTTCTTTTTCTATGAAGAGAACGAATACATGTGGAACGGTGGAACACAAGCAAGAACAGGGAAAAAGTTCAAGTACATCTTTCCAAAATTCACTCTTTGTTGGACTGAGATTGTCGAATTGAAAGCTCGTGTTCCGTGTGAAACCGAGTCTTACATACTGGCGAACTATGGGCAAAATTGGCGTGTGCCAATCAAAGAATGGAACTGGAAAGAAAGCCCGCCAAATGTACGAGAAAATGGCCAGTGGGACAAAAGAGACTGGGATGAAGTTATACAACTATTTTGAGCATTAAACTGGGAATAGCCTGCGTAGCTGACGCGCCAACAAAAAAACCGCCAGCTACGCAGGCTAAACTAGGAACTGTAAGGTGGACTCAGGGAGAACGGACTAAACTATAATAAAGTCAAACCTCCGCCAACGTACAACTCCCGTAGGCGGACACCTCCGTTCTTAGTCCGAGCCTTGTGGTGaattaatcagaaaacctaacgcggagagatttcgacgtttcgatgacatcctgtcatcattatcaagaaaatgaagaaTTTAACTTAATAACAAAAGTCAATcttgtgatgaattgttctgaatttaaactctaagtttctgtctttgaaaacgtctttccggtctgattcactactttcttcagcttgtaattcggccaaaacctctttagtgtggtcatcatagttttcatttgtaggctccttgtagttagaatgaaccagacCCTtgacaaaaacgcgaaatatactgttgctctaattttccttgcaatcgcgaaaattaatactcgcgaaattcggctcccgtattttcgcgaaattaagtacgcgcgaaaaGAATAAAACTGCTCTAATATAACTTACAAACTGAACTTCTTACTCCATAATTTATGAGCGATAAAAATAACCGGCCAGTATGAAAATTTAAATAGTAGCTTTTATAAACAACATTATTTATTAAAAACAACAGTGTCAACAAAACAGGTAGTAaggggctattcacataataccggaatgactttcattcgggaacgagttcattccatctccCGCTCTGTCTGTCTC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19737 all species →	FKTN_N	Fukutin N-terminal	Domain	Interproscan
PF04991 all species →	LicD	LicD family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045587 all species →	Domain	Ribitol-5-phosphate transferase FKTN, N-terminal	Interproscan
IPR007074 all species →	Family	LicD family	Interproscan
IPR009644 all species →	Family	Ribitol-5-phosphate transferase FKTN-related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15407 all species →	FUKUTIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006486 all species →	Biological Process	protein glycosylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19872	FKTN; fukutin	EC:2.7.8.-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.