Gene detail

Detailed information of TcoG022967.mRNA1 in Tubastraea coccinea

Genomic Location: ptg001362l:1210766...1218770
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

TcoG022967.mRNA1

ACATTTCAAATATGGCGGACACAGCTGGGAGCACTTGGCACGGAATCATCGCAAAACGTACAATTTTATTTTTTGTGGGATAGCAAAGCGACACCCTTTACCCAAGTAATAATGGATGAGCTTGTTGCGGACCTTAGCAGTGCTTTAGATCGAACGAATGATCCACCTTCGGCTCATTCCGACACAACGATTGGCACCAGAGAGTCTCCCTCGGGAACTCCGATACGAAGAACGTCAAGAAAGAGACGAGGTAGAAAAAAGCGCCGATCGGACTATCATCCGCTACGAGAACGTCCTAATGCCAGTGCAGAAAGCAATGATTCGGTGGAAGAAGCTTTAATGGACTACATTGAAAATATTAAGTGTCAAAGTGATACCGATCCAGAGGACGAGACGTCCTTTACGAAACGTTTGTTGAGGGTTCAACTTCATGGGCGGGATAATTTAGACCCGTATCCCGTTCCGGAGAGGGAAAAGGGAGAAAGTGATTCTGTCAGTGAGCCATTAGTTGGATTAACAAAGCGTAGAAAGAAGCGAAAGAGGAAGCACAAGCGTGTTTCCGCGTCTCAAGCGCTAAATGATCGCGATTCTCCCCATGCTTATGTGAATACGCGGAAACGAAAAGTCTGTGGAAAGTCTGCCACCGGAAGCGAAATTCATAACAGCTTCAGAAGAAGAGATGAAGAAGGAAGTTTGGCGGATATTGAAAATGGTTTGAGTAGTGGGTGTGGGGAACCAATGGAGACAAACACTTCCTCAAATCATTTCTATAAGTTGCCTTCGAGGTTACATCATGCTTCGAACAAACACCATAACTTACCTCATTCATCTTCCTGGTTACACAACGAAGATTGTGATGAAAAAATGACACTGGATAGCCTTAAAGCTGATCTCTCTTCCTCAGGAGAGAGTGATCTAGAAGGGTTTTTTACGACTGATGAGGGTCGTCTTGGGGATGACGAAAAGGAAGAGAGCTCATTTGAATGTGACGTGAGGATAAATCCATGGTGGGATGGGAAAACCTCAAGTGATATAGAAGAAGACAAATTCCAAAACATTGTGAATGGAGTTATGGATGAATACAGAAGGCCGTTTGTTTCTGGTATTGAAGGAAAGGGTGGTTTGGGACTCCAAGGAAGACTAAAGAAAAATCAAAACATTAATGGAcagGATATTACCGCGGGTGATGTCAACAGGAATATTGCAGTTTTTCTGCAGAATGACAAATGGACAGAGCTGTCTATATATCCATCCAACAAGTTGGAAAGAGCTCAGGTTTACCAATGGGCATCATTGTACTCCCTTCAGTGTCAGGCAGACCCCGCCCACAGAGGAAGAGTGTTACTTCGTAAAACAAGTCACTCATCTCCTCCAAGACATCACAGCCGTCCGGGAGCAGAATCCAAACGACGCAGGAAAATGCCACCTCAGCTTGACAGTTCACATTCGACAGTAGGCGGGGAAGCTGACCCAATACCAACTTCAAACATTGGCAATCAGATGCTGAGGGTCATGGGATGGACTCCTGGAACAGGACTTGGATCTGAAAGAAATGGCATCAAGGATCCTGTTCGCGCTTACTTGAGACCAAAAGGGTTAGGACTGGGCCATCCCTGGCCTTCATGAGAATCTGATAAGAATTAAAAGAAGGAAGAATTTTTATTTATTTACAGGAGAATAAAGTTGTTACTTAAGCTCTGCCATTTTTATTTTTATTTAACAAATTTTAATGATGAATTTTTTGAGCTTTTAACTTAAAAAGAAAGAGAACAGTGTACAGAACAGGTTGTGTTGATCAACTTAAAAATGGAATAAAGATCTCAATCAGTGAATATATTTGTTTGGCATTTTTAACAATAACTAGCCTGGACTTTGAAATTGCCCTTAATGATTATgacttgctcacgccatacataacacgaattgcgtcgtcaattaaaatcagcccataactcgctcgctagctcgcaacacgaaaaaagttgtaggattttgaaacatgttttaaaaccctacaatcgtagccacatacaatgttatatgatgcgagttgcacacaatttt

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01585 all species →	G-patch	G-patch domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000467 all species →	Domain	G-patch domain	Interproscan
IPR036867 all species →	Homologous_superfamily	R3H domain superfamily	Interproscan
IPR051189 all species →	Family	Splicing-associated domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14195 all species →	G PATCH DOMAIN CONTAINING PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17569	GPATCH2; G patch domain-containing protein 2	-	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.