Gene detail

Detailed information of TcoG024273.mRNA1 in Tubastraea coccinea

Genomic Location: ptg001500l:310805...364185
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

TcoG024273.mRNA1

ATGAGTGGGAGACCACAGGGCCGTGGTAGGCAAACACGCAGAGATCGTTCTCAGCGAAACAGAGGCCGAGACAACTCTGCGGACTCAGTAAGCAGCACTACAAGTACTCAAAGTGAAAGAGAAAGAGATCGAGAACAACGAAATGGGCGGAACTCCAGACGTCGTCCTGAAAAGAAAGACGAACGAGGCAGACGAAGAAACGAAGAAAATAAAAGAGATGTACCTGATAGGGAAGGTGGGAAAGCTAACGCCGTTGAAAAGGATAAGGGGAAACAGCGCTCGGACAGTGAGAAACAACCTTCTCGCGGTAGAGGAGAAACCAGCCGAGATGTTCCTAGGGAGTTAAACCGAGAAAATTTTGGTGCTAAAGGTTCGGCTAATGAACGTAATAACATGTTTGGTGATGATTCTCGTCTGTCACATCTTATAAAGAGGATTACCAAAGAGGCTGAAAGAGATCGTCGTATAACTGCAATTCAGCAGCTTGATGAATTCCTTAATAATCCCGATAATTACCAGGTGATAGACAAGCATGCAGAGAATCTTTTTTCAACCTTGGAGGATGTGCTATATGAAAGGGGCCAACAAGACGTGAAAGAGAAGCTAGCAGCATGTATCGGTGTGATCGGAGGAGTTTTAGGCAATGAGGCTGGAAGGTTTTTTCAGTGGATTTTTGCCAAACTTGAGTCCTCTGTATCTGATGAGGTCAAGATCTTGTTTCTCTCGGCACTGTCAAAGGCAATTCAAGTGGATACAAAAAACAAGTACTTCAGGGATTTCATGATGAATGTCATGAGCAGCTTGCAAAATATCTTGGAAAATGTGGATACATCAGAATTGCTGCGTGCAGCTCTGAATGTGATGATGCCCATTGCTTTGGACTACCCACATGCATTTGCTGGACATTTTAGGGACACTGTTGATATCCTTGTTGGGTGGCACATTGATACCTCACAACAGACTTCTCTCACAAGCTACACATCAGAATGCTTGGTTAAGCTGCATGATTACTGGGCATCAGACATAGCCTTCTCTCTAACACTCCTGAGTCAGTTTTTAGAAGATATGGAGGCTTATGCTGAGGAATTAGGCATGTTGTCAAACCAAGTTGTGAGTTCAGATGAAATTCCATTACCTTACGTGTCTCTTCCAAGGTTGACAGCACTAGTCAGAGTGTTCACAACAGTTGTGAATGGCATAGGACCCAGCTTCTCACCAAACAGAAGTCCATCCATCACGCCACCTTATCTGACTGAGTTGATACAAAGAATTATTCAATGCATCAACATGTCTGGCTACTCGTACTACTATGAAAAGCTGTTTATATCAGCAAATCAGTGTTTAGAGTCCATGTGTTCATGGCTTCAACCTTACTTTTCTTGCTGCTGTGAAATAACAGCATCATTTGTGATTCAGCAACTCCAGAGCACCTCCTGCGTTACCTATCCTCACATCATGTCTGCTCTTCAGCTGATAGAAAAGGTTATTGCTCATGTCAATACAGCTATCCCTGCAGCCTTCATTCAACAGCTTTTGGAGCCTAGTTCTCCTGTAATGAAGTTACGACTATCCTCTGACCAATCAGTTCTGTCATTAGTGATGAAGATCTATCAAGGTTTTCTTGGCATCCATGATGTCCCACTTTTGGAGACTGCTTACAAGATTGCTGTAACAGAACTGACTGACAGCTTTGCCCTTCTGAAGAAAACATCAGACAGCTGTGCTGAAACAGAGAGCAGGTTAGAGCCTCAATCAAGCAGCAAAAACAGCAAGGACACTTCTGTTGACCCAGAAGACAAAGATGTCCAAACTGGAGCATCAAATCTTAATGAAAATATTCCTGCCACTAGCTTGGTGCAGTGCCGCAGCAGTCATGAGCTGGAAACTATTCTTATCTTTGACTTGTGTGGTCTTTCAGAGATTGCAACATCCAAGTCTGCTATTCTGAGGCTGTGGAAACTGTCACCCAGCCCTTATCAGCTGCTCACTCAGCATCTTGATGCCTGCGAGTGGAGAATTGCTGTGTGTCATCCATCTGTACAGTACACCATCCTTCATGCGTTGTACACATACTGTCAGAGGTATAACCATTTTCTCCCTAATTCCCAATCAGAAGGAATACGTGTCTCAGAGGATGGAGACATGATATCAATGTTCAGCTTACTTTCCAAAGTGTTAGGAAATTCCAGCACACCAGAAGATTCCAGAAAATTGTGTTTAGTGTGGCTGGTTGAAGTCTTCGACAAAACACTGAACAGTGGTGTCCTTACATTGGTGAGCAAGCATGTGAACCTGGATTCCATAGCACAAAACATTTTGCCTTCCACTTTTGACTACAATCCCAGTATATCACTAGAGGTTTCTCTCTGTCTGAACATCTTGGTTGATCTGAAGGTCTTATCAAGGGACTGCCTTAGAAAGTTCTTGGAAGATTGTGCCATCCGCTTGATGGATGTGAACAAAGATGTCCGTGAGAACTACCAACAGCTCATCAAAGCTTTACCAACTGACCTTTTAACAAGTTCCTTACACCAGAGCCTGTTTGAATCAAGAACCACTCAAGGTAGAGGAGGAGGTCGTGTTGACGTCGGCAAACCCTTGATCACCAGCTGCACTGATGTCTGGCTGGCTCGTAAAGGTCATGCCGTCAAAGCTCCAACCGGCTCTTTCCATTCTCATGATTTTCAAATGGTGATGGGATTTATCTTGTCTGGTATTTTCCCAAGCAAAGATCCAAATGTTGATTGGCTGACAAGGCTTTTTCACAGCTGCAACAGAGTTCAGAAATATGCAGAAACGGAGATGGTTCAGTTTAACAGGTGTGAATCACTGCTTTGGTTCTGGGCCACATGGGAAGCTGCTCAGTTTTGTATTTTGTCTCGACTACGCACTCCGCTTGGTAGAGCTCAAGAAACATTCCAAGCAATTGAAGGTGCCCTGCAGAAGTTTGTGATGGATACAAATGGTGAAGAGGAAAGCAAACCTAAGGCAAAGCATGAAGAACCGCCACCTATGGAAGAAGAGGAACACAAAACAGCTGCTGGGTCCAAACCTTACATGAACCAGCTCCAGTGTGTTTTACTGCTGCAGTTTATAGAGAACCTGGAAAAACTGATGTACAATGGCTATGAAGGATGTGTGGTTGGTCTTCCATCACCACCTAAGTCTGTTCGAACATTTTTCCGTACAAATCGTGGCACATGTCTTGAGTGGTTAACCCGGGTGCGTAAACCAGTGATGAGTGTTGGTTCAGCATGTGGCTGCCCAGCAGCAACCGTTTGGCATGGATTTCAAACTCTCTTGGAAATGAAGACAGCAGGGAACACTCAGGGTGAAGGGTTTAACAATGCAGTACTACTAACAGCTAAAGCCTTGTGTGAACTAAAGAGTGCACATGCCATCTCTGGTTTGATGGCCTGGTGTGAACAAGTTACTGGTCAGAAATATTCCTGGATGAATGGCACTGTTATGAAAGCTCAGGGCTGGTATGAATCATCATCAATGGAATACAAATCAGCAGTGGAAGAGACAATGACAATTGTAACAGAGAAAAGTCACCAGGACGAAAAAAAGACAAGTGAAACAACAACACCCAGTACTTCTGCCACCACGTTTGTTGTTAATGAGGTTGCAGACTGTTATATGAAGTTGTCGTCATGGAATGAGGTAGCAGAGTGGCAGAAACATGTCAGTAACCTAAGGAAACAGTGTTCAGACCCTGATGTACAGCATGCACTCATGGCAAACATCGACATGAACTATGTCAAAGCATTGAGCAAATTTGAAGAATGTGAGTTCTCTTCAGTTCGTGATCATCTTCGGCTGATTCCTGGAGCAGCACTGAACTCTTTGACTGAGAATCTGAGCAAGTCTGCTTGGTCAGTGAAGCTGAATCATCCTGACACAACCTTTACTCCTGTTTGGGCTCCTGGAAAGATTGAACAAACAGCTGAGCTGTCCTTGATTCAAGCACAGACACTGTTTTTCACTTCAGGGCATTTTAAAGCAAAGACAAAGGACAGTAACACAAAAGATCAGAAGATGATTCAAGCCATCAAGGAATGTGTCCATCATGCAACATCATTATGTGAAGGTGTGCTTCGAGTGGGGATGCTGGGGTGGCCATTAGAGGTGTCAGCTTCTCACATTTCTCAACTGCAGTTTGCTGCTGCTGTGGAAAATATCATGGATACTGCTCATCAGCAGGAGGATGTTTTTCCATCATTTCTGCAAGGAGATGGAACTTTTATGGTAGATCATACTCAGCATGACTGTGCAGCCCTGAATAAAGCATTAAGGTTTTGTGGAAACCTTCACTATATCGCATCCTCAGTGGGGAAACATGAAAATAGTTTTAAAAGTGAATTGATTTCACTGCAACTAGCTACAGCACAGCTTGCAAGGAAGCACCATAATTTCAGTCTTGCACAAAGGCTTTTAGTGAAACAGATTTCTTTGCTGGGTAACCCTGTAAAAATTCCACAAGATTTAAACTGCAACAAGAAACAATTTCTGGAGCCATTAATGGAGAGTTTGAACGATGCATCTTTGGCTTCAGCAAAACCAGTTGATGTGATGCAAATACATCGGGAGTGTTCAAAGCTAGCTTTTGCTTTAGGTTACAGTTCAGAGGCTGTATATTTTCTGTCTGACAGCATTTCTCAGTACTCAAACCTGGGCGATATTGATTCAAATGTTGGAACACTAAACTCAAGGTCATTAATTGCACTTGCTAAATGGCTGCTCAATGATCGCAAACTGCTCACTGCAGTCACTAAGATAAATGGAAATGGACTTTCTGTGGCAATGAAAATAAATTCACTGTGCGAGTTGGAAGCAAATTATGTCAGTCTTGGTCATAGTATGCTCATTCTGGCACAAGATGAATCAGCAGAAAGCTGTTTGAATTCTAATACTGTCCCTAGTGTGGCTTGTGGTGTGACAGATGCAGAGTCTGTTTGTGGACAGCTTCTACACTTGGCCACTATGCAGGCACCAGATCTAGGCAAGGCCTGGTTCAATTTAGCGGGATGGTGTTACAGATGGGGAAGGAAGACTGTTGAACAAGCCAGCTCAATGGGAAATGTTGATCTACTACCAAAGGAAAAAGAAACAGTTCTGCAGAGTCTGCCACAGAGTGCTTGTCCAGCTGAGGTGGAGTCAGTCTTGCTAGTGCTGGGTCAGGTGCACGTCACTGCATACTTCAACCAGGAAGAGGATATCGGAGAAGAGGATCAGTTGTATGATGATGGAGTGGAAAGTACCAGGAAGCAGCTTGTAACAGTCTGCCCAGGATTACAGGATGCCCAACCTCAGTTGCTAGATAATCTGTTGTGTGTGTGGAGAGGTGTTAGGGACAGACTGTTTAAACACTACCACTTTGCTGCTAAGGCCTACTTTATGTACCTCAGAATGGGAATGGAGAATTATGATAAATCATCTGGTGCTATAAAGGATGAAACAGTAAACAAACATTGTTCAAAGAACAGTGATGATGACAGTAATGTTACAGCAACCTTGAGATTGCTGCGACTTCTTGTTAAACATGCTGGCGAGCTGCGCAATGAACTGGAGGATGGGCTGGTCAACACCCCTACACGACCCTGGAAAGACATAACTCCTCAGCTGTTTTCACGACTGAACCACCCAGAAAGCTATGTACGGCAGAGTGTATCTGAGTTGCTGTGTCGTGTTGGTCAAGATGCTCCTCATCTGATAGTTTACCCTGCAGTCGTTGGCTGTTCCACTTCTCTTCCAAAGTATTTGCTAAACAAAGGCAAAGAGGGCGAAGGTCTTCTTCCACTTCTTGTGTCGAACTCCACTGACTCATCAACAGAAAACAGCCAAAGTCAATGCAGTCAGTCATATGAAAACCTCGGCAAAACAGAAAGTGATGTGTTGACCAGCTGCTACCAGACTATTGTTGAGTCAATCAGAACACACAACCCTGAGCTGATCTCTGAACTACAAGGATTCATCATGGAGTTACGCAGGATCACTCTGTTATGGGAGGAGTTGTGGCATGGGTCGCTCATGCAGACCCACCATGATGTGACAAGGCGACAGCAACAACTGGAGGAGGAGATCAAGAGAGTCAATGGTAACCAGAACCTAACCAATCACCAAAAGGCTACGCTGATCAGAGAGAAGCATATTGCTATTATGAAGCCGATTGTATTTGCAATAGAACAGTTGAACAAAATCACATGTCAAGAAACTGCCACACCCCATGAGCAGTGGTTCCAGACAACCTACAGTGGTGCTATTCAAGGAGCTCTTGAAGCTTTACAGAATCCACCTGATCCTACAGATTATAGATCCAGCTGGGAGTCATTTAAACAGCTACTCCAAGCACTGCAGGCCAGATCTCAAAAGCGTTCAGCTTATTTGCTTCGCATGGATGAGATCAGCCCCACACTGGCTAAGTTGAAACATTCAGCAGTTTACATGCCAGGCCAGACACATTTCAGTGGAAAGATTGTCACCATTGACTCTGTCATCAATGAAGTCAACATTCTCCCAACCAAGACCAAACCTAAGAAGCTGGTGTTTGTTGGATCAGATGGGCAGAGGTACACTTACTTGTTTAAAGGGCTTGAAGATCTTCATCTTGATGAAAGAATCATGCAGTTCCTCTCCATCTGTAACAACATGTTTGCTAGAGTTGACAGCCACAGTTGTCCTTTGTTTTGTGCTCGTCACTACTCTGTCACGCCTCTAGGCCCTCGGTCAGGTCTGATTCAGTGGGTAGATGGTGCAGTGCCTGTGTTTGCTTTGTTCAAACGCTGGCAGCAAAGAGAAGCCCTGGCTGTTGCACTTGTCAAGTCAGCACAGGGTGCCAATCAGCCACCCCCTCCACCAATGAAGCCAAGTGAACTGTACTACAGCAAAATCACTCCTGCCCTTAAGGAGAAGGGTATCACAGATCTGTCAAACAGAAAAGACTGGCCTCTTGTTTTGATGCGACAAGTGTTGGAGGAGCTTATGAAGGAAACGCCCAGTGACCTGTTGGCCAAGGAGCTATGGTGTTCCAGTACAAGTGCAGCAGAATGGTGGCAGATGACCCAGAGCTATGCTCGCTCCACTGCTGTCATGTCTATGATTGGCTACATCATCGGCTTGGGAGACAGACATTTAGATAACATGCTAGTGGACTTTACAACTGGAGAGGTTGTTCATATCGACTACAATGTGTGCTTTGAGAAAGGTAAAGGATTGAGAGTACCTGAGAAAGTTCCCTTCAGGATGACACCAAACCTTGAAACAGCCTTGGGAGTGACAGGAGTTGAGGGAGTTTTCCGTCTTTCTTGTGAGGAAGTCCTGAAGATTCTGAAGCAGGGGCGCGAGACTCTGCTCACTCTATTGGAGGCGTTTGTTTATGACCCTCTGGTTGACTGGACCACAGCAAATGACACAGCTTTTGCCAGTGCATTCTATGGAGGTGGAGCACCGGGTGTTACTGACAACAAGGTCAACAAGAAAGAGATGGAAAGAGACGTGACACAAAGTCTGTTTTCTTCACGAGTGGCTGAGATGAAAGTCACTTGGACAAACAACAAGGATGAACTTGTGTCAGGCATGGCTAAGTTAGATGAACAGTTGGACATGTACTTAGGGTCAATGAAACAATTAAAAGAGTTGGACTTGTCGACTGAAGAGCTTAAAGATCAACAGGAAACATTGCAGGCAGCCATTAGTAATCCTCAACATCTGCTTCACACAGTACAGGCCAAGTTTGATGAAAAGAAGAAACTGTTGGCTGATCACGATGCAGTATTGCAGACCATTACAGAAAAACTTGCTGAATGTCAACAATGGCAAGTCCAGCACAAAGCTGCAATGGTGACAGTTCATGGACCACAGCTAACATCTCTTGTTACTGAACTTCTAAAGCCTCTTGATCTAGGTCTTCCAAGTTTTGCTCCAGCCATCAGTTTTCTTCAAGGTGCAGGGCAAGGACACATAGTAAACCAGTGTGAACAGCTTGAAACAGAACTTTCAGGCTTGCTTCATCAGCGACGTACCATGTTCCGCTCCTGCCTGGATTTGCTACATACCTATGCCACTGTAACATCACTTTTTCCATCAGATTATGTACAGCAAAACAGGAGTTATGAATGGCAGCATTGGCTTCAGTCTCTAGTGGAAGATTCCTCAACAAAAAATTGCCAAGCTGTGATAGAGGCAAGCGAAAAGATGCACACTAAACCAGTGGCTGATGGTCCTCTGACTCTGGCAGAAGTTACTGGCTTTATGGCCATGGAGGTGAAACTACAGAGCAGCCTGACTGAACAGAATGCTAAGTTTATTAAGTTTTCTGAGCGACGTAAACAAGAGAGTGTTGAAACAGCGTTCCTTAGCAAAGCTGTGAGTGAAGCATATGCAGCATTAAAGAAACATGTTACAGGGAAGCAGCAGCCCACATCTCTGCGTTGTCTTGCTTGTGTGCTAATTACTGCATTGTGCTCTTTGAATAAGAGGTGTCTTGCAATGGAAAACACAGCAAAAGTTGCAAAGGACAGGTTATCTGATCTAACTTCAAGAGAAGGAGACTGGTTTCTTGATGAACTCTGCTCCATGAGTGGAAATGTTAATCAGCTGCTTCTGCTGCTCAAGGATCACTCCATGGAGGTCAAAGATGATCAACAAGCCCTGTTGGGCCGGGCCCAGAACTCCATGAAAGCTGTTTTAGGAGTGCAGAAGGTGTTCATGGCTTTACAGGAACTGATGACAAACTTCAGGACAATAATTGTTCCAGAGGCAGTAAAGAGCATCTATGCAGAGGACCCTGCTGTGTTTGCTGTAGTACGACAGCTTCAAACGGTGACCTGCTCACAAAAGATGAGCCTAAGGGAACTCATTGAGAGCATTCAGGCTCGTCTCTTGGAAATACATTCAACAACCCAGGAGTCGAGTACAGAAGAAGTTGATGCAGCAATCCAGGAAATGAGTGCTCAGTTTGAAAAGCTTCTGCAGACGAATAAAACCCCTGGCTCTGATTCAGGTGAGGATAGTAGCAGTGCCATGACTTCTGGTCAGATGTTGCTTGCAGGATTCAATGGACTCTTTACCAAAGTTGCCAGTGAACTTACAGACATGTTTGCAGCTTTTGAACATGTGCACTTTGATAAGCATGAACTACAGTTTGACATTGTTAAAGATGCACAGGATCTTCAGATTAATGGTGCCAAAAATGCTGAGCTCCTTAGTAAGCTGTTCTTTCTCAAAAGACTGGAAGTTATTATCTCATTCTTCAAGAGCTGTAGACTGGTTACTCTCTCTTTAAAAGGTTTGTCCAGCTCAGGAAGCAAACCGGGAGCCATTAACTGTGCAACAGAGTCTTCACACAATTTGTTCATCAACACAAACAACATCGGTGCCGACATCAAAACATGGAACCCTGAAACTTGTTACAGTGAAGATGATCTGGCCGTGCATGTCAAGCATTTTATAGCTGATTGTGTGCAACAGTGTATAATGGGTTTGCCGTCACAAGCCTTGGCTGGGGTAGTTATTACATTTGCCTCAATTTTGGGGAACAAGAAGGAGAGTATCATTGAGGAGGGTGTAGTTTCTCTAGAGGATTATTGCAAGAAGGTTGTTGATGCTAATGTCTCCAGTGTGCTCATAAAACAAAAACAGCTGTCCCAAATGAGTGCCTTGACAAGTTCTTATGATGTGGCTTGGAGAAAGCATGATTTTGCCAAGCGTCTGGATAACAATATGAGCATTTACAAAGGTGTTGTACAGCGAGCCCAACTTCAACTAGCAAGATTTCAGTGGCTGTATGAGGATGATTTGCTACAGTGCCCCATGAGGGGAAACAACATGATCACACCAGCAAGAGCAACTGTCATGGCTGACCTAAAGAAGCGTGCCCAAGGCCTGCTCCACATGGACTCTGTTGTCAAGGGAGTGGAAGACAAGTTTAATGCGCAGGAGTCCAGTATAGAACAGCGTCTAAAGTGGGCTGCTGGAGCAAACCCTGCACTCAACCCAGTGCTGCAGAGCTTTGAGCAGACCTTAGCTGCTAGAAAGAAACTTATGGCAGTTGAAGGCAAACACTCTTCAGATATCTGTAACTTGTCAAATGCCATTCTGCACTGCGAGGCCCTGCGCACTCACACAGCAGATGCTATGGCAATAGACAACGCCATGACTGCCTTGGTCAAGAGGTGTGAACAAAGCTCTGCGGAGCTGGAAAGCTGCTCCGAAAAGCTTCATGACATTGCAGAAATAGCAAAGAAGGTGAAGGTATCATATCCACCTGAAGCACCCATCACCTTGGACTGGATGAAGAACAAGTTAGAGGCTGTTGGTCAGGAGGTGGCATCCATCAAGACTAGAAAGTCACAGACTACCCAAGCTATTATGAGTAACAGAGATTCCATCAAGTCTCAAGCAAGCAAAGTGAAATCAATAATGGTTTCCCATCAGCAGCTCATTGGAGAAGTTAAATCCATGCTGACCACAATGGCAAAGGATGAAGAAGCAGCAGAGTCCCGCCCAGCCAAGCTGTTTATATCCACACACAACCGCCAATCAGAGGAGTGCGCTCAGCTTATTAAAAGCATCTTAGCAGTTTGTTCTGGAAAGATCAGTGATGCAAGAGACAGCGTAGAAGACAACATCATGGAAGTAAAAGGCATGGTCAAGTCAATCAAATCTCTTGTGCAGTGGGTTCATGACCACCTTCTGTCACTAGCTTCACCTCTTGTTCCTGATGAGTCTGGTTCCAGTGGAGGAAAAACACCCATCGCTGCCCCACCACCCACATTTGCATCAGCGCTTCGTCAAGGTAGTAGTGTTAGTATACAAGGTGGTAAGGATTGTGTAGCACCAGACACTGTATCTCCTCACCCAATCATCCTTCAGAGGGACATGGCAGCCAGTCCATCTGGTGCTGGCTCACCAACAGCCTCCACCAGGCCAATGGCAGTGGCAAGCCCCAGAAGAATTTCAACAGCAAATCTGGCAAGGGACCCTAGAACTGGCAAAGCCCTTCAAGAGAGGAACACATATGCAATCAGTGTGTGGCGACGCGTTAAATCTAAGCTGGATGGCAGAGATCAAGATAATAACAAGAAAATGTCCATTCCAGACCAGGTTGACTTTGTTATCCGTGAGTCACGTAGTGTGGACAATCTGAGCCAGATGTATGAAGGATGGACAGCCTGGGTGTAA

Transcript

TcoG024273.mRNA1

Protein

TcoG024273.mRNA1

MSGRPQGRGRQTRRDRSQRNRGRDNSADSVSSTTSTQSERERDREQRNGRNSRRRPEKKDERGRRRNEENKRDVPDREGGKANAVEKDKGKQRSDSEKQPSRGRGETSRDVPRELNRENFGAKGSANERNNMFGDDSRLSHLIKRITKEAERDRRITAIQQLDEFLNNPDNYQVIDKHAENLFSTLEDVLYERGQQDVKEKLAACIGVIGGVLGNEAGRFFQWIFAKLESSVSDEVKILFLSALSKAIQVDTKNKYFRDFMMNVMSSLQNILENVDTSELLRAALNVMMPIALDYPHAFAGHFRDTVDILVGWHIDTSQQTSLTSYTSECLVKLHDYWASDIAFSLTLLSQFLEDMEAYAEELGMLSNQVVSSDEIPLPYVSLPRLTALVRVFTTVVNGIGPSFSPNRSPSITPPYLTELIQRIIQCINMSGYSYYYEKLFISANQCLESMCSWLQPYFSCCCEITASFVIQQLQSTSCVTYPHIMSALQLIEKVIAHVNTAIPAAFIQQLLEPSSPVMKLRLSSDQSVLSLVMKIYQGFLGIHDVPLLETAYKIAVTELTDSFALLKKTSDSCAETESRLEPQSSSKNSKDTSVDPEDKDVQTGASNLNENIPATSLVQCRSSHELETILIFDLCGLSEIATSKSAILRLWKLSPSPYQLLTQHLDACEWRIAVCHPSVQYTILHALYTYCQRYNHFLPNSQSEGIRVSEDGDMISMFSLLSKVLGNSSTPEDSRKLCLVWLVEVFDKTLNSGVLTLVSKHVNLDSIAQNILPSTFDYNPSISLEVSLCLNILVDLKVLSRDCLRKFLEDCAIRLMDVNKDVRENYQQLIKALPTDLLTSSLHQSLFESRTTQGRGGGRVDVGKPLITSCTDVWLARKGHAVKAPTGSFHSHDFQMVMGFILSGIFPSKDPNVDWLTRLFHSCNRVQKYAETEMVQFNRCESLLWFWATWEAAQFCILSRLRTPLGRAQETFQAIEGALQKFVMDTNGEEESKPKAKHEEPPPMEEEEHKTAAGSKPYMNQLQCVLLLQFIENLEKLMYNGYEGCVVGLPSPPKSVRTFFRTNRGTCLEWLTRVRKPVMSVGSACGCPAATVWHGFQTLLEMKTAGNTQGEGFNNAVLLTAKALCELKSAHAISGLMAWCEQVTGQKYSWMNGTVMKAQGWYESSSMEYKSAVEETMTIVTEKSHQDEKKTSETTTPSTSATTFVVNEVADCYMKLSSWNEVAEWQKHVSNLRKQCSDPDVQHALMANIDMNYVKALSKFEECEFSSVRDHLRLIPGAALNSLTENLSKSAWSVKLNHPDTTFTPVWAPGKIEQTAELSLIQAQTLFFTSGHFKAKTKDSNTKDQKMIQAIKECVHHATSLCEGVLRVGMLGWPLEVSASHISQLQFAAAVENIMDTAHQQEDVFPSFLQGDGTFMVDHTQHDCAALNKALRFCGNLHYIASSVGKHENSFKSELISLQLATAQLARKHHNFSLAQRLLVKQISLLGNPVKIPQDLNCNKKQFLEPLMESLNDASLASAKPVDVMQIHRECSKLAFALGYSSEAVYFLSDSISQYSNLGDIDSNVGTLNSRSLIALAKWLLNDRKLLTAVTKINGNGLSVAMKINSLCELEANYVSLGHSMLILAQDESAESCLNSNTVPSVACGVTDAESVCGQLLHLATMQAPDLGKAWFNLAGWCYRWGRKTVEQASSMGNVDLLPKEKETVLQSLPQSACPAEVESVLLVLGQVHVTAYFNQEEDIGEEDQLYDDGVESTRKQLVTVCPGLQDAQPQLLDNLLCVWRGVRDRLFKHYHFAAKAYFMYLRMGMENYDKSSGAIKDETVNKHCSKNSDDDSNVTATLRLLRLLVKHAGELRNELEDGLVNTPTRPWKDITPQLFSRLNHPESYVRQSVSELLCRVGQDAPHLIVYPAVVGCSTSLPKYLLNKGKEGEGLLPLLVSNSTDSSTENSQSQCSQSYENLGKTESDVLTSCYQTIVESIRTHNPELISELQGFIMELRRITLLWEELWHGSLMQTHHDVTRRQQQLEEEIKRVNGNQNLTNHQKATLIREKHIAIMKPIVFAIEQLNKITCQETATPHEQWFQTTYSGAIQGALEALQNPPDPTDYRSSWESFKQLLQALQARSQKRSAYLLRMDEISPTLAKLKHSAVYMPGQTHFSGKIVTIDSVINEVNILPTKTKPKKLVFVGSDGQRYTYLFKGLEDLHLDERIMQFLSICNNMFARVDSHSCPLFCARHYSVTPLGPRSGLIQWVDGAVPVFALFKRWQQREALAVALVKSAQGANQPPPPPMKPSELYYSKITPALKEKGITDLSNRKDWPLVLMRQVLEELMKETPSDLLAKELWCSSTSAAEWWQMTQSYARSTAVMSMIGYIIGLGDRHLDNMLVDFTTGEVVHIDYNVCFEKGKGLRVPEKVPFRMTPNLETALGVTGVEGVFRLSCEEVLKILKQGRETLLTLLEAFVYDPLVDWTTANDTAFASAFYGGGAPGVTDNKVNKKEMERDVTQSLFSSRVAEMKVTWTNNKDELVSGMAKLDEQLDMYLGSMKQLKELDLSTEELKDQQETLQAAISNPQHLLHTVQAKFDEKKKLLADHDAVLQTITEKLAECQQWQVQHKAAMVTVHGPQLTSLVTELLKPLDLGLPSFAPAISFLQGAGQGHIVNQCEQLETELSGLLHQRRTMFRSCLDLLHTYATVTSLFPSDYVQQNRSYEWQHWLQSLVEDSSTKNCQAVIEASEKMHTKPVADGPLTLAEVTGFMAMEVKLQSSLTEQNAKFIKFSERRKQESVETAFLSKAVSEAYAALKKHVTGKQQPTSLRCLACVLITALCSLNKRCLAMENTAKVAKDRLSDLTSREGDWFLDELCSMSGNVNQLLLLLKDHSMEVKDDQQALLGRAQNSMKAVLGVQKVFMALQELMTNFRTIIVPEAVKSIYAEDPAVFAVVRQLQTVTCSQKMSLRELIESIQARLLEIHSTTQESSTEEVDAAIQEMSAQFEKLLQTNKTPGSDSGEDSSSAMTSGQMLLAGFNGLFTKVASELTDMFAAFEHVHFDKHELQFDIVKDAQDLQINGAKNAELLSKLFFLKRLEVIISFFKSCRLVTLSLKGLSSSGSKPGAINCATESSHNLFINTNNIGADIKTWNPETCYSEDDLAVHVKHFIADCVQQCIMGLPSQALAGVVITFASILGNKKESIIEEGVVSLEDYCKKVVDANVSSVLIKQKQLSQMSALTSSYDVAWRKHDFAKRLDNNMSIYKGVVQRAQLQLARFQWLYEDDLLQCPMRGNNMITPARATVMADLKKRAQGLLHMDSVVKGVEDKFNAQESSIEQRLKWAAGANPALNPVLQSFEQTLAARKKLMAVEGKHSSDICNLSNAILHCEALRTHTADAMAIDNAMTALVKRCEQSSAELESCSEKLHDIAEIAKKVKVSYPPEAPITLDWMKNKLEAVGQEVASIKTRKSQTTQAIMSNRDSIKSQASKVKSIMVSHQQLIGEVKSMLTTMAKDEEAAESRPAKLFISTHNRQSEECAQLIKSILAVCSGKISDARDSVEDNIMEVKGMVKSIKSLVQWVHDHLLSLASPLVPDESGSSGGKTPIAAPPPTFASALRQGSSVSIQGGKDCVAPDTVSPHPIILQRDMAASPSGAGSPTASTRPMAVASPRRISTANLARDPRTGKALQERNTYAISVWRRVKSKLDGRDQDNNKKMSIPDQVDFVIRESRSVDNLSQMYEGWTAWV

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002223 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02260 all species →	FATC	FATC domain	Family	Interproscan
PF15785 all species →	SMG1	Serine/threonine-protein kinase smg-1	Family	Interproscan
PF00454 all species →	PI3_PI4_kinase	Phosphatidylinositol 3- and 4-kinase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000403 all species →	Domain	Phosphatidylinositol 3-/4-kinase, catalytic domain	Interproscan
IPR003152 all species →	Domain	FATC domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR039414 all species →	Domain	SMG1, PIKK catalytic domain	Interproscan
IPR031559 all species →	Family	Serine/threonine-protein kinase SMG1	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR014009 all species →	Domain	PIK-related kinase	Interproscan
IPR050517 all species →	Family	DNA Damage Response and Repair Kinase	Interproscan
IPR018936 all species →	Conserved_site	Phosphatidylinositol 3/4-kinase, conserved site	Interproscan
IPR036940 all species →	Homologous_superfamily	Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11139 all species →	ATAXIA TELANGIECTASIA MUTATED ATM -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000184 all species →	Biological Process	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0016310 all species →	Biological Process	phosphorylation	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08873	SMG1; serine/threonine-protein kinase SMG1	EC:2.7.11.1	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Co-expression network

Genes whose expression across the transcriptome samples of Tubastraea coccinea tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.

No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.

Single-cell expression

Whether this gene can be visualised in the single-cell atlases of Tubastraea coccinea, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.

No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.

Epigenetic marks

Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.

No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.

What you can do with this gene

Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.

Analysis	What it does	Status
Primer design	Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed.	template found	open →
BLAST	Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start.	template found	open →
Expression heatmap	Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it.	no expression matrix	–
Gene family / orthogroup	Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue.		open →
Gene set analysis	Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it.		open →