Gene detail

Detailed information of TcoG027111.mRNA1 in Tubastraea coccinea

Genomic Location: ptg001806l:33931...43062
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

TcoG027111.mRNA1

GTCAGAATCAAAATGGCGAACGATGGCAAGCCTTTGATATCTAAGGACATTCTTTACACAGGAGATGGAGATATACCTACTTGTGAACACGGATCCAAGGCTACCTTTCATTTCAAGACTTTTAAAACCGATGAAGATAAGACGCTGATAGATTGCAGCCGTGCTCTTGGACAGCCTTTTGAGCTCCTTATTGGCAAGAAATTCAAGCTGGCAGTTTGGGAGGAACTTATAAAAACCATGAGGGAAAAAGAAGTGGCTCGTTTTATGTGTCATAAATCGCTTGTAGGAGGGTATCCTATAGTGTCCAAGAGTTTGCGCACTGTTGCAAAGAAGGCAAAAGGAGAGTTAACTGAGGAACATGACCATCATGAACATTCTTGCAGCTTGTCAGCCATGAAATCTACAGGTTACCCAGACTTGGATGACTTACTTGTCAATGAACAAGATCTTATCTTTGAATTAGAGCTTCTGAAATTCGAGAAACCTGGTGAATTCGTAAAGGAAACATGGCAAATGGATGCTGAGGAGAAGTTGTCCATTGTACCAGGATTGAAAGAGGCTGGAAATAAACTCTATCAAGAGAAAAGGTACAAAGAAGCTGCAGAGAAATATGCAGAGGCATTGGGCTGTCTTGAGCAGTTGTGTCTTCGTGAAAAACCTGGTGATAAGCCTTGGCTTAATCTTGACCAAATGAAGATTCCTTTCTTGCTAAACTATGCACAGTGTAAGCTCTATCTTGGTGATTTTTATGAAGTTATTGAGCACACATCAACGGTACTTGAAAAAGACAAGGATAATGTCAAGGCTTTGTTCAGACGTGCAAAGGCTCACGTCAAATGCTGGAATTCTAAGGAAGCTAAGGAAGATTTCAACAGAGCGGCAGCTTTAAATCCATCTTTAACAAAAGCTGTCAAGAAAGAGCTTGATGAAATTGAGAGACTCACTAAAGAGCATGATACCCAGGACAGAGACAGGTTAAAAACACTTTTTAAGTGATGGATGAACTGTAGAGTATCGGGGATCGCACTTCATGTAAATTGCTGGGTTCCCTGTTGAGTATCAGGGATGTCACTTCATTTTTAATTTTTAATTTACTGTACCTTATTTAAAAGACACATTCCACTTCACTACATACAAGCAATAAATAATGCTTGTGAAAATTACATACAATGCTAATGAGGAATAAAACAAAGACGAAAAAAACTATACAATAAGTTAATATAGAAGAAAGTACATTGGAGTTTTTCCCATCAGTTACTGTGTATTTCAATGTGCAAGAGCAGTTTTACATGTTTCAATTTTCCATTGCGTTAAAATTTTATGTTTCAGTTCATTAAATTCTTCATTAAATTAGAATCTTTTCGATCATTTTAAATGAATAAAAGTACTTTTGGACTAATACTATGAAGATTCCTAATTTTCGGCTTAGTCGGTGTTGGATTAGTCTCTGGGGGCAGATTGTAATCTTTAAAAAGAAGTTCTTGACTGGACAGGTTAAAGTCAGTATTATGTTCATTGTTAAACCACAGTGTACTTTCACGGTAGAAATTGGTGGCAGTTGAGCATTCCAGAAACGTATGTTCTAAAGAATCAGGGAGTTTACAGAAGAAACACTGATCGTTTCGCGCGGTTTTAAACCTAttaaggtgactcctaatagtttaaacattcccatcatgatacatctatgatattcaatcacagctacatcagtaaagttaagagaaaacgtttagtacaggtttgtaaacacttaaccaatgaacaaatttaggaggctacgacatcaaaatttgttaccatggcaacgtcaaaagaggccaaaaagaccccattttcaaccttttgaggctaataacttcaaaactgctctgtgaaatgttttgatttttatacattttcgtcttataaacataaacatttgcgccaattttgaaaaaaatctgtacatgggattcagagatatgtcatttttacataaatttaaggtagctctgaactctatgtacagaattttttaaaaacttgttaaaatgtttctcttgccaattaaacaaaaatatatcgaaaacaaaaactttcaccgtgtagtttataagttattagcctcaaatggtccaaaatagcgtatttttgacctcttttcgcgttgccatggcaacgaatgatgacgtcatttgaataccacgttgactgataaaagatttactggttccaactaaaagatttttagccacaccatcgggctagctgtagtggaatgcaaaagacgagagggctgaacaata

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00254 all species →	FKBP_C	FKBP-type peptidyl-prolyl cis-trans isomerase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR039663 all species →	Family	AIP/AIPL1/TTC9	Interproscan
IPR046357 all species →	Homologous_superfamily	Peptidyl-prolyl cis-trans isomerase domain superfamily	Interproscan
IPR001179 all species →	Domain	FKBP-type peptidyl-prolyl cis-trans isomerase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11242 all species →	ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003755 all species →	Molecular Function	peptidyl-prolyl cis-trans isomerase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17767	AIP, XAP2; AH receptor-interacting protein	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.