Gene detail

Detailed information of TcoG032164.mRNA1 in Tubastraea coccinea

Genomic Location: ptg002519l:385896...397195
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006899 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06320 all species →	GCN5L1	GCN5-like protein 1 (GCN5L1)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009395 all species →	Family	Biogenesis of lysosome-related organelles complex 1 subunit 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13073 all species →	BLOC-1 COMPLEX SUBUNIT 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016197 all species →	Biological Process	endosomal transport	Interproscan
GO:0031083 all species →	Cellular Component	BLOC-1 complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20185	BLOC1S1; biogenesis of lysosome-related organelles complex 1 subunit 1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.