Detailed information of TcoG032371.mRNA1 in Tubastraea coccinea

Genomic Location: ptg002543l:631442...643118
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyUBD|PH|GLUE · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11605
all species →
Vps36_ESCRT-IIVacuolar protein sorting protein 36 Vps36DomainInterproscan
PF04157
all species →
EAP30EAP30/Vps36 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021648
all species →
DomainVacuolar protein sorting protein 36, GLUE domainInterproscan
IPR037855
all species →
FamilyVacuolar protein sorting protein 36Interproscan
IPR040608
all species →
FamilySnf8/Vps36 familyInterproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13128
all species →
VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0032266
all species →
Molecular Functionphosphatidylinositol-3-phosphate bindingInterproscan
GO:0043130
all species →
Molecular Functionubiquitin bindingInterproscan
GO:0000814
all species →
Cellular ComponentESCRT II complexInterproscan
GO:0031902
all species →
Cellular Componentlate endosome membraneInterproscan
GO:0032509
all species →
Biological Processendosome transport via multivesicular body sorting pathwayInterproscan
GO:0043328
all species →
Biological Processprotein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for TcoG032371.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP