Gene detail

Detailed information of TcoG033076.mRNA1 in Tubastraea coccinea

Genomic Location: ptg002673l:552...26617
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

TcoG033076.mRNA1

GCATATAAGGAAGAAATTCGAAATCCGGAGGTAAACAAATGCTTGAAATCTCCTTGAGCTATTCAGTTCATCTTTGAGCTGAGTAAGTGTCCCGATGCACTGGAGATAAAGAAGTGAGAGTGGCTGTCCCTAAACTGGGCAGTGAGGTCTGTGCACTAATGGATCGGAGAAAAAGAGACTTCTTTAAGGGTTAAGAAAAAACAAAGAAGCAACAGCCTTCCCCCTGTTACCTGGGAAGAGACCCCCCACAAAAAAAATTCATGTCCAGGACTCTTCCTTTTTATGATTACTTTTCAACATGCCGTTTCTTGCTGACGCCCAGAAGTCTACGCCCCGTAGTGATTTTCATAAAGCCATCTACGCAATCAGAGGGATTGGAACTACAAGAGGAATGGCATGTGCAGTTGATTTTGCGAAAAAAGACCCGGGACAACCAAGACAAGACAACAGAACAGGCTCTGTATGTTTAGTCACTTGGAGTGGTTGCATTGTGGAGCATAAGTCAGTCAAAGTGGACCGCTATTCAAGGAAAAACATGGGAGACTACCAACTCAGAATTTCAAACGTCATCAAGACTAAAAATTTTTCTTTCCTTACCGTGATGGGGGAAAAGAAAGAATGTCCCAAGAGTCTCTCTGTAAAGTATTTGAAAAATGAAGAACAAACGACAAACTTCATGGTTTATACAATTCCACCTTCGAAAAAGCTTAAGGAACTAACTTTACAGTACAATCATAACACTAAGAAGCACGATCTCATCATTTCTGAAAAGCGACATGATTTTTCCTTACTTGGATCTCCAATCATTATGAATGAAAAGAATGAAGAGTATTTTGTAGGAGTTTTAAAGGAAAATGATACAGGCGAACCAATTCCCTTTTTCATAGCGGAAGAAGAAGTTGAAACCAGCATCTTGGCAGCTGGACGGACCCCCTCTGAAGGATTTGATTCATTACCAAGAAAGGAAACTAGTCGAGATTCAAACTTGACAGAAGAGGACCTTGGTGCCAGTTGTTCAAATACAACTCAAGAAACTGATCAAGACGAAACCAGCATCTTGGCAGCTGGACGGACCCCCTCTGAAGGATTTGATTCATCACCAGGAAAGGAAACTAGTCGAGATTCAAACTTGACAGAAAAGGAACTTGGTGCCAGTTGTTCAAATACAACTCAAGAAACTGATCAAGACGGTGCGGGAGAGTCTAATTATCTACCAATAGAAATAGAGGAAACTAGTCAAGTTTCTCCCGCCGACGATTTTCATCTGAAACAACATCTGCGTAAGAACACAGAAGATGCCCTTTCTTGCACAGACGGTCAGGAAAAGCAGGAAGAGCAAGCTGGTATTTCCCCATATAGCTCACCAATCATGCAAGAAAGTAATCAAGTAAAACAGCCAACCTGTATGAAGAGGCCAATTTCCAaagtcccgaatgttgctcttgtatctcaattaggtggagtagaacatcgaccaacaacagagtccctgacagGCTTTTATAGACGTTTGTCTGATCTTCCGCGTTCTGTTCGACAATTTGTCGGTCGTAATCAAGAAATCAACGACATCAAGAAATACGTTGGACCAAACCCAGAGAACGACTGCAGGTGTGTCTTAATTCATGGTGCTGTTGGGATGGGGAAAACAGCCACTGCTATCAATGCGGCAAACGAGATCCGGGATAACAAAGATAACACTGCCGTTGTGTACATCAACTGCAACTATGTCAGTTCACTTGATGATCTCGCTGGGAAAATTTCCAAACAACTCCACCATATTCCCTTTAACGAGCCCATTGAAGAAGTAAAAAGATGGCTCATAAATGAACAGAATCTCTTCACGATACTGTTGTTGGACAACTTTCAATTTTTGCTCCCGATGAGTGCAAATGGGCAAGCCAACTGTATGCAGCTTGAATTGAGGCGGATAGACCGTACCGAAAGCCTAAAAATCACCACATTCATCACAGAAATTGTCACAGCTTCCGCAAAAGTAAAATTGCTGGTTACCTCATCAGAGATTGTTGCTTTTCATGAAACAGGTCAACAACTAATAAGGCTGCACGCCTTGGAAAAGGATCACTCATTCGAGCTTCTGAAGATCACCTATGGTAACTCTATTCAGGTGGAGAAAGAAATTGCGTACAAAATAGCTGACTTTTGTGATGGAATTCCACTCGCCCTTATTTCCTTAGCCTCATCGTATGACCATCCAC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13191 all species →	AAA_16	AAA ATPase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050311 all species →	Family	Origin Recognition Complex 1/Cell Division Control Protein 6	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR041664 all species →	Domain	Orc1-like, AAA ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10763 all species →	CELL DIVISION CONTROL PROTEIN 6-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003688 all species →	Molecular Function	DNA replication origin binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0033314 all species →	Biological Process	mitotic DNA replication checkpoint signaling	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19483	NAV2; neuron navigator 2	EC:5.6.2.4	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.