Detailed information of TcoG033397.mRNA1 in Tubastraea coccinea

Genomic Location: ptg002754l:90421...120171
NR annotation: no NCBI-NR hit recorded
Species Tubastraea coccinea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001938 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00136
all species →
DNA_pol_BDNA polymerase family BFamilyInterproscan
PF03104
all species →
DNA_pol_B_exo1DNA polymerase family B, exonuclease domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006134
all species →
DomainDNA-directed DNA polymerase, family B, multifunctional domainInterproscan
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR030559
all species →
FamilyDNA polymerase zeta catalytic subunitInterproscan
IPR023211
all species →
Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan
IPR006133
all species →
DomainDNA-directed DNA polymerase, family B, exonuclease domainInterproscan
IPR006172
all species →
FamilyDNA-directed DNA polymerase, family BInterproscan
IPR012337
all species →
Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397
all species →
Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45812
all species →
DNA POLYMERASE ZETA CATALYTIC SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000166
all species →
Molecular Functionnucleotide bindingInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0000724
all species →
Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003887
all species →
Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006281
all species →
Biological ProcessDNA repairInterproscan
GO:0016035
all species →
Cellular Componentzeta DNA polymerase complexInterproscan
GO:0019985
all species →
Biological Processtranslesion synthesisInterproscan
GO:0042276
all species →
Biological Processerror-prone translesion synthesisInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for TcoG033397.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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